RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 S100A11P31949 105 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 NRG3P56975 720 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 RAP2BP61225 183 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 MESP2Q0VG99 397 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 STX4Q12846 297 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 UBE3DQ7Z6J8 389 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 DCUN1D3Q8IWE4 304 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 C1orf216Q8TAB5 229 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 NARS2Q96I59 477 aaKnown RBP12.72□□□□□ -0.37
SYNE3-201ENST00000334258 FAM83CQ9BQN1 747 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 IL23AQ9NPF7 189 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 SIDT1Q9NXL6 827 aaKnown RBP12.72□□□□□ -0.37
SYNE3-201ENST00000334258 FBXL4Q9UKA2 621 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 NOTCH4Q99466 2003 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 RIIAD1A6NNX1 92 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 RLN1P04808 185 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 ZGLP1P0C6A0 271 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 VIPR2P41587 438 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 CLDN12P56749 244 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 HLXQ14774 488 aaPredicted RBP12.71□□□□□ -0.37
SYNE3-201ENST00000334258 DPPA4Q7L190 304 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 PDZD9Q8IXQ8 264 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 CCDC36Q8IYA8 594 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 OR51L1Q8NGJ5 315 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 OR9A2Q8NGT5 310 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 PTP4A1Q93096 173 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 CNRIP1Q96F85 164 aaPredicted RBP12.71□□□□□ -0.37
SYNE3-201ENST00000334258 OR14A2Q96R54 314 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 ARHGDIGQ99819 225 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 BCL2L14Q9BZR8 327 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 LDAHQ9H6V9 325 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 TAS2R10Q9NYW0 307 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 MED11Q9P086 117 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 ZMIZ1Q9ULJ6 1067 aa12.71□□□□□ -0.37
SYNE3-201ENST00000334258 A0A1B0GUH1 482 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 J3QRE1 110 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 SIGLEC5O15389 551 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 HYAL3O43820 417 aaPredicted RBP12.71□□□□□ -0.38
SYNE3-201ENST00000334258 KRT33AO76009 404 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 SERPINA3P01011 423 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 THY1P04216 161 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 ATP1B1P05026 303 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 SBK2P0C263 348 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 CSNK2A2P19784 350 aaPredicted RBP12.71□□□□□ -0.38
SYNE3-201ENST00000334258 PBX2P40425 430 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 PDX1P52945 283 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 LGALS3BPQ08380 585 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 SIGLEC14Q08ET2 396 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 MAPK14Q16539 360 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 TMEM240Q5SV17 173 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 C11orf88Q6PI97 169 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF547Q8IVP9 402 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 CMIPQ8IY22 773 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 CDK20Q8IZL9 346 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 OR4C6Q8NH72 309 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 FCAMRQ8WWV6 532 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 ARSGQ96EG1 525 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 HS6ST2Q96MM7 605 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF106Q9H2Y7 1883 aaKnown RBP12.71□□□□□ -0.38
SYNE3-201ENST00000334258 KLHL31Q9H511 634 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 ANKRD19PQ9H560 264 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 CALML5Q9NZT1 146 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 ATG4BQ9Y4P1 393 aa12.71□□□□□ -0.38
SYNE3-201ENST00000334258 SPDEFO95238 335 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 ADH1AP07327 375 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 GIPP09681 153 aaPredicted RBP12.7□□□□□ -0.38
SYNE3-201ENST00000334258 HOXB1P14653 301 aaPredicted RBP12.7□□□□□ -0.38
SYNE3-201ENST00000334258 TYRP14679 529 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 ACADLP28330 430 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 BMP8BP34820 402 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 GDI2P50395 445 aaKnown RBP12.7□□□□□ -0.38
SYNE3-201ENST00000334258 SEC61A1P61619 476 aaKnown RBP12.7□□□□□ -0.38
SYNE3-201ENST00000334258 BAIAP2L2Q6UXY1 529 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 BMP8AQ7Z5Y6 402 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 PXKQ7Z7A4 578 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 OR6V1Q8N148 313 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 PFN4Q8NHR9 129 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 SCARB1Q8WTV0 552 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 WBP1Q96G27 269 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 PIPOXQ9P0Z9 390 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 NTMQ9P121 344 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 KLHL9Q9P2J3 617 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 INSL6Q9Y581 213 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 FRYLO94915 3013 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.7□□□□□ -0.38
SYNE3-201ENST00000334258 UBE2QL1A1L167 161 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 MAN2B1O00754 1011 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 ECDO95905 644 aaPredicted RBP12.7□□□□□ -0.38
SYNE3-201ENST00000334258 LINC00271P0C7V0 271 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 GKN3PP0CG01 181 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 IFNGR1P15260 489 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 DUSP2Q05923 314 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 C18orf63Q68DL7 685 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 TFAP2EQ6VUC0 442 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF793Q6ZN11 406 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 FCRLAQ7L513 359 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 OR52B4Q8NGK2 314 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 SNX33Q8WV41 574 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 PGLYRP3Q96LB9 341 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 SLC25A18Q9H1K4 315 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms