RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 SPARTQ8N0X7 666 aa21.17■□□□□ 0.98
TSEN54-201ENST00000333213 BEST3Q8N1M1 668 aa21.17■□□□□ 0.98
TSEN54-201ENST00000333213 PAQR8Q8TEZ7 354 aa21.17■□□□□ 0.98
TSEN54-201ENST00000333213 DNAJA4Q8WW22 397 aaPredicted RBP21.17■□□□□ 0.98
TSEN54-201ENST00000333213 ZNF566Q969W8 418 aa21.17■□□□□ 0.98
TSEN54-201ENST00000333213 NTNG2Q96CW9 530 aa21.17■□□□□ 0.98
TSEN54-201ENST00000333213 SCNM1Q9BWG6 230 aa21.17■□□□□ 0.98
TSEN54-201ENST00000333213 NAA50Q9GZZ1 169 aaKnown RBP21.17■□□□□ 0.98
TSEN54-201ENST00000333213 ATP13A2Q9NQ11 1180 aa21.17■□□□□ 0.98
TSEN54-201ENST00000333213 MED11Q9P086 117 aa21.17■□□□□ 0.98
TSEN54-201ENST00000333213 RPS6KB2Q9UBS0 482 aa21.17■□□□□ 0.98
TSEN54-201ENST00000333213 NDRG4Q9ULP0 352 aaKnown RBP21.17■□□□□ 0.98
TSEN54-201ENST00000333213 WIF1Q9Y5W5 379 aa21.17■□□□□ 0.98
TSEN54-201ENST00000333213 SOX14O95416 240 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 CHMP24386 653 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 GPR4P46093 362 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 GSSP48637 474 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 RPP38P78345 283 aaKnown RBP21.16■□□□□ 0.98
TSEN54-201ENST00000333213 AIMP2Q13155 320 aaKnown RBP21.16■□□□□ 0.98
TSEN54-201ENST00000333213 RAPSNQ13702 412 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 JMJD6Q6NYC1 403 aaPredicted RBP21.16■□□□□ 0.98
TSEN54-201ENST00000333213 ATG4DQ86TL0 474 aaPredicted RBP21.16■□□□□ 0.98
TSEN54-201ENST00000333213 RNF113BQ8IZP6 322 aaKnown RBP21.16■□□□□ 0.98
TSEN54-201ENST00000333213 ZNF563Q8TA94 476 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 FBLIM1Q8WUP2 373 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 FER1L6-AS2Q96M78 137 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 NPAS1Q99742 590 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 ADAM19Q9H013 955 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 HPF1Q9NWY4 346 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 TP53I11O14683 189 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 NUDT14O95848 222 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 SDHBP21912 280 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 ITGA3P26006 1051 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 SLC1A3P43003 542 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 CBFBQ13951 182 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 MEP1AQ16819 746 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 TMEM81Q6P7N7 255 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 PIGXQ8TBF5 258 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 FRMD6Q96NE9 622 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 LHPPQ9H008 270 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 DSN1Q9H410 356 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 PCDHGB1Q9Y5G3 927 aa21.16■□□□□ 0.98
TSEN54-201ENST00000333213 BCKDKO14874 412 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 CLPXO76031 633 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 HNRNPCP07910 306 aaKnown RBP eCLIP21.15■□□□□ 0.98
TSEN54-201ENST00000333213 CCDC159P0C7I6 412 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 PRKAR1AP10644 381 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 OSMP13725 252 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 FUT1P19526 365 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 MAKP20794 623 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 TSPAN31Q12999 210 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 PTGES3Q15185 160 aaKnown RBP21.15■□□□□ 0.98
TSEN54-201ENST00000333213 ZNF691Q5VV52 312 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 KIF18BQ86Y91 864 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 WDSUB1Q8N9V3 476 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 GNPDA2Q8TDQ7 276 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 MUL1Q969V5 352 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 HRASLS5Q96KN8 279 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 SECISBP2Q96T21 854 aaKnown RBP21.15■□□□□ 0.98
TSEN54-201ENST00000333213 STMN3Q9NZ72 180 aa21.15■□□□□ 0.98
TSEN54-201ENST00000333213 IGKV1D-42A0A075B6H8 117 aa21.14■□□□□ 0.98
TSEN54-201ENST00000333213 IGLV3-32A0A0A0MS00 114 aa21.14■□□□□ 0.98
TSEN54-201ENST00000333213 PGCP20142 388 aa21.14■□□□□ 0.98
TSEN54-201ENST00000333213 TACR3P29371 465 aa21.14■□□□□ 0.98
TSEN54-201ENST00000333213 PRKCDQ05655 676 aa21.14■□□□□ 0.98
TSEN54-201ENST00000333213 QPRTQ15274 297 aa21.14■□□□□ 0.98
TSEN54-201ENST00000333213 TMEM236Q5W0B7 351 aa21.14■□□□□ 0.98
TSEN54-201ENST00000333213 DND1Q8IYX4 353 aaKnown RBP21.14■□□□□ 0.98
TSEN54-201ENST00000333213 CHPT1Q8WUD6 406 aa21.14■□□□□ 0.98
TSEN54-201ENST00000333213 UBE2FQ969M7 185 aa21.14■□□□□ 0.98
TSEN54-201ENST00000333213 PITX2Q99697 317 aa21.14■□□□□ 0.98
TSEN54-201ENST00000333213 MED31Q9Y3C7 131 aa21.14■□□□□ 0.98
TSEN54-201ENST00000333213 DMXL2Q8TDJ6 3036 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 ARGFXA6NJG6 315 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 MAGEB3O15480 346 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 CDC40O60508 579 aaKnown RBP eCLIP21.14■□□□□ 0.97
TSEN54-201ENST00000333213 F10P00742 488 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 FPR3P25089 353 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 IFNGR2P38484 337 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 RBM34P42696 430 aaKnown RBP21.14■□□□□ 0.97
TSEN54-201ENST00000333213 BMXP51813 675 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 CRISP1P54107 249 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 TPD52P55327 224 aaPredicted RBP21.14■□□□□ 0.97
TSEN54-201ENST00000333213 ISL1P61371 349 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 COX10Q12887 443 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 SNTA1Q13424 505 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 KEAP1Q14145 624 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 ARSKQ6UWY0 536 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 CLEC1AQ8NC01 280 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 HS6ST2Q96MM7 605 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 ADNPQ9H2P0 1102 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 CPNE5Q9HCH3 593 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 PPP4R1LQ9P1A2 415 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 OSGIN1Q9UJX0 560 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 HSPE1-MOB4S4R3N1 261 aa21.14■□□□□ 0.97
TSEN54-201ENST00000333213 EFSO43281 561 aa21.13■□□□□ 0.97
TSEN54-201ENST00000333213 IFI30P13284 250 aa21.13■□□□□ 0.97
TSEN54-201ENST00000333213 ZNF182P17025 639 aaPredicted RBP21.13■□□□□ 0.97
TSEN54-201ENST00000333213 CTBP2P56545 445 aa21.13■□□□□ 0.97
TSEN54-201ENST00000333213 EGR4Q05215 589 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms