RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TSPAN9O75954 239 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 HOXD4P09016 255 aaPredicted RBP21.81■■□□□ 1.08
TSKU-201ENST00000333090 NDUFS1P28331 727 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 ACTC1P68032 377 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 ACTA1P68133 377 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 DUSP8Q13202 625 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 UBE2NLQ5JXB2 153 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 TBC1D3GQ6DHY5 549 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 LRRC25Q8N386 305 aaPredicted RBP21.81■■□□□ 1.08
TSKU-201ENST00000333090 UXS1Q8NBZ7 420 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 KCT2Q8NC54 265 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 OR51L1Q8NGJ5 315 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 OR52I2Q8NH67 350 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 RIT1Q92963 219 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 SMIM19Q96E16 107 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 LINC00052Q96N35 136 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 EMC3Q9P0I2 261 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 ACSL5Q9ULC5 683 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 PCDHGA9Q9Y5G4 932 aaKnown RBP21.81■■□□□ 1.08
TSKU-201ENST00000333090 VCANP13611 3396 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 CTDSPLO15194 276 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 ARHGAP11BQ3KRB8 267 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 FAM69AQ5T7M9 428 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 METTL11BQ5VVY1 283 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 RPL13AP3Q6NVV1 102 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 SEZ6L2Q6UXD5 910 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 MTSS1LQ765P7 747 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 SERPINA12Q8IW75 414 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 PELI1Q96FA3 418 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 PDCD1LG2Q9BQ51 273 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 ABHD14A-ACY1A0A1B0GW23 586 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 PEX12O00623 359 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 CTRB1P17538 263 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 RAD52P43351 418 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 CDK5R1Q15078 307 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 HES5Q5TA89 166 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 CTRB2Q6GPI1 263 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 C3P1Q6ZMU1 363 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 HDDC3Q8N4P3 179 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 OR2L3Q8NG85 312 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 LHFPL5Q8TAF8 219 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 GRHL3Q8TE85 626 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 CA10Q9NS85 328 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 SPHK1Q9NYA1 384 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 MED31Q9Y3C7 131 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 MID1O15344 667 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 PRAF2O60831 178 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 AGR2O95994 175 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 ATP1B1P05026 303 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 LINC00271P0C7V0 271 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 CXCL2P19875 107 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 GBX2P52951 348 aaPredicted RBP21.8■■□□□ 1.08
TSKU-201ENST00000333090 BTN1A1Q13410 526 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 NHLRC3Q5JS37 347 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 OR52E1Q8NGJ3 308 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 OR2L8Q8NGY9 312 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 MOSPD2Q8NHP6 518 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 SDHAF2Q9NX18 166 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 KLK11Q9UBX7 282 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 ZNF69Q9UC07 566 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 KIF25Q9UIL4 384 aa21.8■■□□□ 1.08
TSKU-201ENST00000333090 L7N2F9 121 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 SERPINI2O75830 405 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 NAA10P41227 235 aaPredicted RBP21.79■■□□□ 1.08
TSKU-201ENST00000333090 APOOLQ6UXV4 268 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 UBE2Q1Q7Z7E8 422 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 ZCCHC4Q9H5U6 513 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 MEPEQ9NQ76 525 aaPredicted RBP21.79■■□□□ 1.08
TSKU-201ENST00000333090 FBXO34Q9NWN3 711 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 GATBO75879 557 aaKnown RBP21.79■■□□□ 1.08
TSKU-201ENST00000333090 UCHL1P09936 223 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 NAGAP17050 411 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 SNRPNP63162 240 aaKnown RBP21.79■■□□□ 1.08
TSKU-201ENST00000333090 SIM1P81133 766 aaPredicted RBP21.79■■□□□ 1.08
TSKU-201ENST00000333090 FAAP20Q6NZ36 180 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 TMEM81Q6P7N7 255 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 TMPRSS11FQ6ZWK6 438 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 ZBTB44Q8NCP5 570 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 WBP1Q96G27 269 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 NPDC1Q9NQX5 325 aaPredicted RBP21.79■■□□□ 1.08
TSKU-201ENST00000333090 ZNF275Q9NSD4 429 aaPredicted RBP21.79■■□□□ 1.08
TSKU-201ENST00000333090 DOCK9Q9BZ29 2069 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 TBC1D3EA0A087X179 549 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 TRBV2A0A0J9YWF9 115 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 A0A1B0GUH1 482 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 BET1O15155 118 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 KHDRBS3O75525 346 aaKnown RBP21.79■■□□□ 1.08
TSKU-201ENST00000333090 C4BPBP20851 252 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 MAT2AP31153 395 aaKnown RBP21.79■■□□□ 1.08
TSKU-201ENST00000333090 EPHA4P54764 986 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 RPS11P62280 158 aaKnown RBP eCLIP21.79■■□□□ 1.08
TSKU-201ENST00000333090 FAM198BQ6UWH4 519 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 MEIOBQ8N635 442 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 C10orf90Q96M02 699 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 ADAP2Q9NPF8 381 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 NRIP3Q9NQ35 241 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 MBNL1Q9NR56 388 aaKnown RBP21.79■■□□□ 1.08
TSKU-201ENST00000333090 PLEKHM1Q9Y4G2 1056 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 KCNMB2Q9Y691 235 aa21.79■■□□□ 1.08
TSKU-201ENST00000333090 SCN2AQ99250 2005 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms