RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 KIF18BQ86Y91 864 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 ARMC8Q8IUR7 673 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 DMRTC2Q8IXT2 367 aaPredicted RBP12.55□□□□□ -0.4
LIMS1-201ENST00000332345 SLC43A2Q8N370 569 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 POU5F2Q8N7G0 328 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 DDIT4LQ96D03 193 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 STARD4Q96DR4 205 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 GMPPAQ96IJ6 420 aaPredicted RBP12.55□□□□□ -0.4
LIMS1-201ENST00000332345 SLC39A3Q9BRY0 314 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 NPDC1Q9NQX5 325 aaPredicted RBP12.55□□□□□ -0.4
LIMS1-201ENST00000332345 KLHL28Q9NXS3 571 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 JKAMPQ9P055 326 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 OSGIN1Q9UJX0 560 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 PACSIN3Q9UKS6 424 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 AP3M1Q9Y2T2 418 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 EMC9Q9Y3B6 208 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 HDGFL3Q9Y3E1 203 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 CHST2Q9Y4C5 530 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 CENPEQ02224 2701 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 TMED7-TICAM2A0A0A6YYA0 188 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 A0A1W2PNR3 127 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 M0QX08 132 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 MSTNO14793 375 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 AIM2O14862 343 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 ZNF208O43345 1280 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 SMNDC1O75940 238 aaKnown RBP eCLIP12.54□□□□□ -0.4
LIMS1-201ENST00000332345 PRKD3O94806 890 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 IGFBP2P18065 325 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 CCNA2P20248 432 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 AQP1P29972 269 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 PCBP3P57721 371 aaKnown RBP12.54□□□□□ -0.4
LIMS1-201ENST00000332345 ZNF239Q16600 458 aaKnown RBP12.54□□□□□ -0.4
LIMS1-201ENST00000332345 VMACQ2NL98 169 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 RABL3Q5HYI8 236 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 FCRLAQ7L513 359 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 PIGWQ7Z7B1 504 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 PATL1Q86TB9 770 aaKnown RBP12.54□□□□□ -0.4
LIMS1-201ENST00000332345 CADM2Q8N3J6 435 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 ACBD4Q8NC06 268 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 ROBO4Q8WZ75 1007 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 RCN3Q96D15 328 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 HOPXQ9BPY8 73 aaPredicted RBP12.54□□□□□ -0.4
LIMS1-201ENST00000332345 RBM24Q9BX46 236 aaKnown RBP12.54□□□□□ -0.4
LIMS1-201ENST00000332345 PIF1Q9H611 641 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 TMED7Q9Y3B3 224 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 CELSR2Q9HCU4 2923 aa12.54□□□□□ -0.4
LIMS1-201ENST00000332345 MPDZO75970 2070 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 A8MXE2 369 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 FXYD1O00168 92 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 MFN2O95140 757 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 PRG2P13727 222 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 ENPP1P22413 925 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 PCGF2P35227 344 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 CPA2P48052 419 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 DIO1P49895 249 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 GZMMP51124 257 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 SIRPAP78324 504 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 ERICH5Q6P6B1 374 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 BTLAQ7Z6A9 289 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 ARPINQ7Z6K5 226 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 LUZP2Q86TE4 346 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 CALHM3Q86XJ0 350 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 ZZZ3Q8IYH5 903 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 SLC26A7Q8TE54 656 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 RASSF5Q8WWW0 418 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 ZHX1-C8orf76Q96EF9 292 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 SRXN1Q9BYN0 137 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 MYLK2Q9H1R3 596 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 COQ10BQ9H8M1 238 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 GP6Q9HCN6 339 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 TMEM181Q9P2C4 612 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 RPS6KB2Q9UBS0 482 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 TRAPPC4Q9Y296 219 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 ARL2BPQ9Y2Y0 163 aa12.53□□□□□ -0.4
LIMS1-201ENST00000332345 DNPH1O43598 174 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 TPST1O60507 370 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 SS18L1O75177 396 aaPredicted RBP12.52□□□□□ -0.41
LIMS1-201ENST00000332345 PMS2P2O95744 297 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 C8BP07358 591 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 CD8BP10966 210 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 PRDX6P30041 224 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 MYBPHQ13203 477 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 VEZF1Q14119 521 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 GUSBP1Q15486 140 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 TMEM201Q5SNT2 666 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 VWA1Q6PCB0 445 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 CCDC80Q76M96 950 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 TREML1Q86YW5 311 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 OR6K3Q8NGY3 331 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 RNF128Q8TEB7 428 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 ZNF583Q96ND8 569 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 ZNF559Q9BR84 538 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 TACO1Q9BSH4 297 aaKnown RBP12.52□□□□□ -0.41
LIMS1-201ENST00000332345 POTEKPQ9BYX7 375 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 TRIM2Q9C040 744 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 PLSCR4Q9NRQ2 329 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 SELENONQ9NZV5 590 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 KLHL9Q9P2J3 617 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 KCNN3Q9UGI6 736 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 CLEC4AQ9UMR7 237 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms