RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 PRF1P14222 555 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 CEBPBP17676 345 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 VIPR2P41587 438 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 CTSCP53634 463 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 TBPL1P62380 186 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 TRAM2Q15035 370 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 TCEAL5Q5H9L2 206 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 C18orf63Q68DL7 685 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 SEZ6L2Q6UXD5 910 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 ZNF740Q8NDX6 193 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 OR52B4Q8NGK2 314 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 IRF7Q92985 503 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 SCAMP4Q969E2 229 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 RAD51AP1Q96B01 352 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 NDC1Q9BTX1 674 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 QRSL1Q9H0R6 528 aaKnown RBP16.82■□□□□ 0.28
PKP3-201ENST00000331563 FN3KQ9H479 309 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 ENTPD4Q9Y227 616 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 KLHL18O94889 574 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 GPR143P51810 404 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 BDH1Q02338 343 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 ZNF660Q6AZW8 331 aaPredicted RBP16.82■□□□□ 0.28
PKP3-201ENST00000331563 C22orf39Q6P5X5 142 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 LSRQ86X29 649 aaPredicted RBP16.82■□□□□ 0.28
PKP3-201ENST00000331563 ZFP82Q8N141 532 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 C17orf47Q8NEP4 570 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 BPIFCQ8NFQ6 507 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 DMBX1Q8NFW5 382 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 KLK6Q92876 244 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 OR1F2PQ96R84 312 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 GAL3ST1Q99999 423 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 TMPRSS13Q9BYE2 586 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 UCK1Q9HA47 277 aa16.82■□□□□ 0.28
PKP3-201ENST00000331563 AKAP7Q9P0M2 348 aaPredicted RBP16.82■□□□□ 0.28
PKP3-201ENST00000331563 IGLV3-16A0A075B6K0 115 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 B4GALT2O60909 372 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 SOCS5O75159 536 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 EGFP01133 1207 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 MT-ND5P03915 603 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 STAT5AP42229 794 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 AP3S2P59780 193 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 STXBP1P61764 594 aaKnown RBP16.81■□□□□ 0.28
PKP3-201ENST00000331563 SNTB1Q13884 538 aaKnown RBP16.81■□□□□ 0.28
PKP3-201ENST00000331563 PGGHGQ32M88 737 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 MRGPREQ86SM8 312 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 SERPINA12Q8IW75 414 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 OR52I2Q8NH67 350 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 LMLNQ96KR4 655 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 KLK11Q9UBX7 282 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 SCN8AQ9UQD0 1980 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 DISC1C4P0D8 188 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 FOXE1O00358 373 aaPredicted RBP16.81■□□□□ 0.28
PKP3-201ENST00000331563 FMO6PO60774 539 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 GMFBP60983 142 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 C11orf88Q6PI97 169 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 TMEM17Q86X19 198 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 OR5M1Q8NGP8 315 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 OR56A3Q8NH54 315 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 BBS10Q8TAM1 723 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 LCORQ96JN0 433 aaPredicted RBP16.81■□□□□ 0.28
PKP3-201ENST00000331563 TSNAXQ99598 290 aaKnown RBP16.81■□□□□ 0.28
PKP3-201ENST00000331563 PRMT8Q9NR22 394 aaPredicted RBP16.81■□□□□ 0.28
PKP3-201ENST00000331563 SPHK2Q9NRA0 654 aa16.81■□□□□ 0.28
PKP3-201ENST00000331563 AK6Q9Y3D8 172 aaKnown RBP16.81■□□□□ 0.28
PKP3-201ENST00000331563 UBE2QL1A1L167 161 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 PRAMEF27A3QJZ7 478 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 CACNB4O00305 520 aaPredicted RBP16.8■□□□□ 0.28
PKP3-201ENST00000331563 FLRT2O43155 660 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 PRAMEF2O60811 474 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 CA3P07451 260 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 C1GALT1C1LP0DN25 315 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 SAGP10523 405 aaPredicted RBP16.8■□□□□ 0.28
PKP3-201ENST00000331563 ARFIP1P53367 373 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 PNLIPRP1P54315 467 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 PSMD4P55036 377 aaKnown RBP16.8■□□□□ 0.28
PKP3-201ENST00000331563 SNRPD1P62314 119 aaKnown RBP16.8■□□□□ 0.28
PKP3-201ENST00000331563 RELQ04864 619 aaPredicted RBP16.8■□□□□ 0.28
PKP3-201ENST00000331563 ZDHHC20Q5W0Z9 365 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 FAM83HQ6ZRV2 1179 aaPredicted RBP16.8■□□□□ 0.28
PKP3-201ENST00000331563 ADIPOR2Q86V24 386 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 LRRTM4Q86VH4 590 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 CBLN2Q8IUK8 224 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 FAM98AQ8NCA5 519 aaKnown RBP16.8■□□□□ 0.28
PKP3-201ENST00000331563 LGALS14Q8TCE9 139 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 EFCAB11Q9BUY7 163 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 TTTY10Q9BZA0 68 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 SUV39H2Q9H5I1 410 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 C8orf33Q9H7E9 229 aaPredicted RBP16.8■□□□□ 0.28
PKP3-201ENST00000331563 NEUROD4Q9HD90 331 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 ZNF275Q9NSD4 429 aaPredicted RBP16.8■□□□□ 0.28
PKP3-201ENST00000331563 ABRACLQ9P1F3 81 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 ICKQ9UPZ9 632 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 NPFFR2Q9Y5X5 522 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 VCANP13611 3396 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 MTCL1Q9Y4B5 1905 aaKnown RBP16.8■□□□□ 0.28
PKP3-201ENST00000331563 TSPAN6O43657 245 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 ALPPL2P10696 532 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 ZNF35P13682 527 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 CPN1P15169 458 aa16.8■□□□□ 0.28
PKP3-201ENST00000331563 PTGFRP43088 359 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms