RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 BLACEA4D250 179 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 MT-ND5P03915 603 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 OR1D4P47884 311 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 SLC3A1Q07837 685 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 P2RY14Q15391 338 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 FAAH2Q6GMR7 532 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 ARHGAP11AQ6P4F7 1023 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 ZSCAN1Q8NBB4 408 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 ADAMTS18Q8TE60 1221 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 FOXQ1Q9C009 403 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 MMP28Q9H239 520 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 UCK1Q9HA47 277 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 MKKSQ9NPJ1 570 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 CHRNA9Q9UGM1 479 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 BAIAP2Q9UQB8 552 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 IER3IP1Q9Y5U9 82 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 A8MUA0 341 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 TFECO14948 347 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 MAGEB4O15481 346 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 IFNGP01579 166 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 NKX2-5P52952 324 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 SMAD4Q13485 552 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 GPR50Q13585 617 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 PRAMEF17Q5VTA0 474 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 AGAP6Q5VW22 663 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 TTLL10Q6ZVT0 673 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 MED25Q71SY5 747 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 SGTBQ96EQ0 304 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 AGAP4Q96P64 663 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 C11orf54Q9H0W9 315 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 INPP5EQ9NRR6 644 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 PNO1Q9NRX1 252 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 GRIP1Q9Y3R0 1128 aa13.64□□□□□ -0.23
CLCNKA-201ENST00000331433 RP1P56715 2156 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 A0A087WUJ7 227 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 EFCAB7A8K855 629 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 IMPA2O14732 288 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 DYRK3O43781 588 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 NDUFB2O95178 105 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 GAAP10253 952 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 ALAS2P22557 587 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 SHC1P29353 583 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 ACVR1BP36896 505 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 PSMD4P55036 377 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 RACK1P63244 317 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 RPL6Q02878 288 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 CCDC85BQ15834 202 aaPredicted RBP13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 ZNF517Q6ZMY9 492 aaPredicted RBP13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 OR5J2Q8NH18 312 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 C3orf49Q96BT1 292 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 KCNN2Q9H2S1 579 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 ERVMER34-1Q9H9K5 563 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 OIP5O43482 229 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 PYCR1P32322 319 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 RPL4P36578 427 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 GPR143P51810 404 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 ASAH1Q13510 395 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 CD226Q15762 336 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 TCTE1Q5JU00 501 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 VASH1Q7L8A9 365 aaPredicted RBP13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 C17orf82Q86X59 251 aaPredicted RBP13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 CMIPQ8IY22 773 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 PTPMT1Q8WUK0 201 aaPredicted RBP13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 SLC35B4Q969S0 331 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 HSPA12BQ96MM6 686 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 SERTAD3Q9UJW9 196 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 POU2F3Q9UKI9 436 aa13.63□□□□□ -0.23
CLCNKA-201ENST00000331433 TFP02787 698 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 GALP22466 123 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 NAA10P41227 235 aaPredicted RBP13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 CCR4P51679 360 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 IL18Q14116 193 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 KLHL26Q53HC5 615 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 IDNKQ5T6J7 187 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 UBQLNLQ8IYU4 475 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 ZPLD1Q8TCW7 415 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 ZNRF4Q8WWF5 429 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 TSLPQ969D9 159 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 AHCYL2Q96HN2 611 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 ZNF578Q96N58 590 aaPredicted RBP13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 OR8D2Q9GZM6 311 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 PPP1R3EQ9H7J1 279 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 KLHL1Q9NR64 748 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 LANCL2Q9NS86 450 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 HAO2Q9NYQ3 351 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 DHCR7Q9UBM7 475 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 PRODH2Q9UF12 536 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 FITM1A5D6W6 292 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 RHPN2P1A8MT19 583 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 LMO7DNF2Z398 122 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 H0YIG0 161 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 SERPINI2O75830 405 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 HTR3AP46098 478 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 EVX1P49640 407 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 CSNK1EP49674 416 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 GRM7Q14831 915 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 KCNJ8Q15842 424 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 TP53I3Q53FA7 332 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms