RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ACTC1P68032 377 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 ACTA1P68133 377 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 POU4F2Q12837 409 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 IL18Q14116 193 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 FAM27D1Q5T7N8 215 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 C17orf47Q8NEP4 570 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 TSTD1Q8NFU3 115 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 LMX1AQ8TE12 382 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 PGLYRP3Q96LB9 341 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 SLC38A3Q99624 504 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 LRRN3Q9H3W5 708 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 ZNF221Q9UK13 617 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 ADAM30Q9UKF2 790 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 ICAM5Q9UMF0 924 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 PLCL2Q9UPR0 1127 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 KNL1Q8NG31 2342 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 A0A1W2PR77 199 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 B4DXG7 233 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 MCIDASD6RGH6 385 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 HYAL3O43820 417 aaPredicted RBP13.37□□□□□ -0.27
TPM3-206ENST00000330188 NME1P15531 152 aaKnown RBP13.37□□□□□ -0.27
TPM3-206ENST00000330188 KIR2DL3P43628 341 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 HSD17B7P56937 341 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 SLC3A1Q07837 685 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 TRAM1Q15629 374 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.37□□□□□ -0.27
TPM3-206ENST00000330188 TRIQKQ629K1 86 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 HBMQ6B0K9 141 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 RPTNQ6XPR3 784 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 RFLNBQ8N5W9 214 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 DEFB119Q8N690 84 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 LRRC17Q8N6Y2 441 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 ZSCAN1Q8NBB4 408 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 OR4K13Q8NH42 304 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 OR51Q1Q8NH59 317 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 LRFN5Q96NI6 719 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 SYNDIG1Q9H7V2 258 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 PCDHGB7Q9Y5F8 929 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 IER3IP1Q9Y5U9 82 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 IGHV5-51A0A0C4DH38 117 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 SC5DO75845 299 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 TFP02787 698 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 IFNA16P05015 189 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 GAS6Q14393 721 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 ATAD3CQ5T2N8 411 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 IDNKQ5T6J7 187 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 DMKNQ6E0U4 476 aaPredicted RBP13.36□□□□□ -0.27
TPM3-206ENST00000330188 GKN2Q86XP6 184 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 UBE2J2Q8N2K1 259 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 FAM98AQ8NCA5 519 aaKnown RBP13.36□□□□□ -0.27
TPM3-206ENST00000330188 C19orf18Q8NEA5 215 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 OR5J2Q8NH18 312 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 ABHD4Q8TB40 342 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 ZMYND19Q96E35 227 aaPredicted RBP13.36□□□□□ -0.27
TPM3-206ENST00000330188 TGM7Q96PF1 710 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 CTRCQ99895 268 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 NEK6Q9HC98 313 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 ST6GALNAC2Q9UJ37 374 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 KLHL21Q9UJP4 597 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 ZNF217O75362 1048 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 KRT8P05787 483 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 ELK1P19419 428 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 CD38P28907 300 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 CEACAM19Q7Z692 300 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 PXKQ7Z7A4 578 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 SCAIQ8N9R8 606 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 C3orf49Q96BT1 292 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 ZNF486Q96H40 463 aaPredicted RBP13.36□□□□□ -0.27
TPM3-206ENST00000330188 LMF1Q96S06 567 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.36□□□□□ -0.27
TPM3-206ENST00000330188 SPRTNQ9H040 489 aaPredicted RBP13.36□□□□□ -0.27
TPM3-206ENST00000330188 MOV10Q9HCE1 1003 aaKnown RBP13.36□□□□□ -0.27
TPM3-206ENST00000330188 SOHLH2Q9NX45 425 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 ADAM18Q9Y3Q7 739 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 NOX1Q9Y5S8 564 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 PCDH15Q96QU1 1955 aa13.36□□□□□ -0.27
TPM3-206ENST00000330188 HMX3A6NHT5 357 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 TTC36A6NLP5 189 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 FAM25AB3EWG3 89 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 FAM25CB3EWG5 89 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 FAM25GB3EWG6 89 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 CD27P26842 260 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 PYCR1P32322 319 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 GALNSP34059 522 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 THBS2P35442 1172 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 ACVR1BP36896 505 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 MAP2K3P46734 347 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 CAPZA2P47755 286 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 HCCSP53701 268 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 GGTLC2Q14390 218 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 KLHL26Q53HC5 615 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 TRILQ7L0X0 811 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 C17orf82Q86X59 251 aaPredicted RBP13.35□□□□□ -0.27
TPM3-206ENST00000330188 ENKURQ8TC29 256 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 ST6GAL2Q96JF0 529 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 UBL7Q96S82 380 aaPredicted RBP13.35□□□□□ -0.27
TPM3-206ENST00000330188 TMEM43Q9BTV4 400 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 TTTY10Q9BZA0 68 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 RNF121Q9H920 327 aa13.35□□□□□ -0.27
TPM3-206ENST00000330188 PRODH2Q9UF12 536 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms