RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 IL20RAQ9UHF4 553 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 CARD8Q9Y2G2 431 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 WDFY3Q8IZQ1 3526 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 UNC119BA6NIH7 251 aa18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 PTTG1O95997 202 aa18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 KLK3P07288 261 aaPredicted RBP18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 NGFRP08138 427 aa18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 UBL4AP11441 157 aa18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 CCKBRP32239 447 aa18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 SLC30A6Q6NXT4 461 aa18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 TMEM205Q6UW68 189 aa18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 HSDL2Q6YN16 418 aa18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 C16orf47Q6ZP98 133 aaPredicted RBP18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 TMPRSS11FQ6ZWK6 438 aa18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 ZNF440Q8IYI8 595 aa18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 OR4Q3Q8NH05 313 aa18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 HTRA1Q92743 480 aa18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 OPALINQ96PE5 141 aa18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 PPIEQ9UNP9 301 aaKnown RBP18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 LSM2Q9Y333 95 aaKnown RBP18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 CDH10Q9Y6N8 788 aa18.56■□□□□ 0.56
RIPPLY3-201ENST00000329553 GTPBP1O00178 669 aaKnown RBP18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 SNX4O95219 450 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 LCN1P31025 176 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 SOX6P35712 828 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 CTBP2P56545 445 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 SKP2Q13309 424 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 OCLNQ16625 522 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 CDK20Q8IZL9 346 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 SAMD8Q96LT4 415 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 ULBP3Q9BZM4 244 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 TEX51A0A1B0GUA7 166 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 GNB5O14775 395 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 ZNF264O43296 627 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 SCG5P05408 212 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 GTF2E2P29084 291 aaKnown RBP18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 PNLIPRP2P54317 469 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 FXYD6P3P58550 94 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 MEDAGQ5VYS4 303 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 CCDC190Q86UF4 302 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 CLDN22Q8N7P3 220 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 MR1Q95460 341 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 LRFN5Q96NI6 719 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 LPAR4Q99677 370 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 CMKLR1Q99788 373 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 PCDHGB6Q9Y5F9 930 aa18.55■□□□□ 0.56
RIPPLY3-201ENST00000329553 GPX5O75715 221 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 CH25HO95992 272 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 ZNF806P0C7X5 589 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 RBM34P42696 430 aaKnown RBP18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 COPZ1P61923 177 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 SELENBP1Q13228 472 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 SLC25A30Q5SVS4 291 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 THAP3Q8WTV1 239 aaPredicted RBP18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 TP53INP1Q96A56 240 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 TXNDC15Q96J42 360 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 KLHDC3Q9BQ90 382 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 ENKD1Q9H0I2 346 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 WDR54Q9H977 334 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 HHATLQ9HCP6 504 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 TMEM5Q9Y2B1 443 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 A0A075B6Q4 140 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 PNMA8CA0A1B0GUJ8 204 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 SYT14P1Q58G82 188 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 MARCH3Q86UD3 253 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 NAXDQ8IW45 347 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 DNAJA4Q8WW22 397 aaPredicted RBP18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 C3orf49Q96BT1 292 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 ZNF524Q96C55 264 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 LRR1Q96L50 414 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 OR52D1Q9H346 318 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 EXOSC3Q9NQT5 275 aaKnown RBP18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 GPN3Q9UHW5 284 aaPredicted RBP18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 GPR52Q9Y2T5 361 aa18.54■□□□□ 0.56
RIPPLY3-201ENST00000329553 B4E171 279 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 ZNF354AO60765 605 aaPredicted RBP18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 ENDOUP21128 410 aaKnown RBP18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 TSPAN7P41732 249 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 CCR4P51679 360 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 NCF4Q15080 339 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 OR13C2Q8NGS9 318 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 SLC38A2Q96QD8 506 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 B3GALT1Q9Y5Z6 326 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 A0A087WUJ7 227 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 C17orf51A8MQB3 221 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 SAGP10523 405 aaPredicted RBP18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 SPNP16150 400 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 ETV5P41161 510 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 CLDN6P56747 220 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 PGGHGQ32M88 737 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 FAM198BQ6UWH4 519 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 TMEM163Q8TC26 289 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 BRIX1Q8TDN6 353 aaKnown RBP18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 TMEM80Q96HE8 168 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 ZNF582Q96NG8 517 aaPredicted RBP18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 NUAK2Q9H093 628 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 RACGAP1Q9H0H5 632 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 UBQLN3Q9H347 655 aa18.53■□□□□ 0.56
RIPPLY3-201ENST00000329553 NPFFR2Q9Y5X5 522 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms