RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 FAM46AQ96IP4 442 aaKnown RBP17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 Q96MT0 163 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 PTTG2Q9NZH5 202 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 TEKT2Q9UIF3 430 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 SLC35A3Q9Y2D2 325 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 KCNMB2Q9Y691 235 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 OIP5O43482 229 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 SCO2O43819 266 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 IGFBP1P08833 259 aaPredicted RBP17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 DCKP27707 260 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 ACAA2P42765 397 aaKnown RBP17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 CCL11P51671 97 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 SMSP52788 366 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 SH3BGRP55822 239 aaPredicted RBP17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 B3GNT6Q6ZMB0 384 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 LINC00696Q6ZRV3 163 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 NRMQ8IXM6 262 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 ZNF440Q8IYI8 595 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 CPAMD8Q8IZJ3 1885 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 TEX47Q8TBZ9 253 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 RNF138Q8WVD3 245 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 NMD3Q96D46 503 aaKnown RBP17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 TMCO6Q96DC7 493 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 HS6ST2Q96MM7 605 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 COPS4Q9BT78 406 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 TBL1XR1Q9BZK7 514 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 HPF1Q9NWY4 346 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 CHCHD2Q9Y6H1 151 aaPredicted RBP17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 ANKRD11Q6UB99 2663 aaPredicted RBP17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 ALG1L2C9J202 215 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 CHP2O43745 196 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 F10P00742 488 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 ITPKBP27987 946 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 GINS1Q14691 196 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 AHSA2Q719I0 299 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 KIF18BQ86Y91 864 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 CLDN22Q8N7P3 220 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 PHOSPHO1Q8TCT1 267 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 FAR1Q8WVX9 515 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 TMEM239Q8WW34 195 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 GGHQ92820 318 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 DOK1Q99704 481 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 POLDIP3Q9BY77 421 aaKnown RBP17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 CPNE5Q9HCH3 593 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 CNOT2Q9NZN8 540 aaKnown RBP17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 CNIH4Q9P003 139 aa17.1■□□□□ 0.33
EXOSC3-201ENST00000327304 A0A0B4J2E0 115 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 A0A1B0GX12 115 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 A0A1W2PQD3 144 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 TP53I11O14683 189 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 CSTAP01040 98 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 MT-ND2P03891 347 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 SLC25A30Q5SVS4 291 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 UNQ6494/PRO21346Q6UXR6 183 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 DND1Q8IYX4 353 aaKnown RBP17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 ISOC1Q96CN7 298 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 MPP4Q96JB8 637 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 RHNO1Q9BSD3 238 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 GALNT9Q9HCQ5 603 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 SH2D2AQ9NP31 389 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 IL20Q9NYY1 176 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 TMEM5Q9Y2B1 443 aa17.09■□□□□ 0.33
EXOSC3-201ENST00000327304 EFCAB10A6NFE3 127 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 ZNF99A8MXY4 864 aaPredicted RBP17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 CDK1P06493 297 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 CCL3P10147 92 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 PTGDSP41222 190 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 RBM34P42696 430 aaKnown RBP17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 PRKCDQ05655 676 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 OCLNQ16625 522 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 AGAP7PQ5VUJ5 663 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 SLC27A4Q6P1M0 643 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 ZNF227Q86WZ6 799 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 CYP4Z2PQ8N1L4 340 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 FAM71CQ8NEG0 241 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 FDCSPQ8NFU4 85 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 RORBQ92753 470 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 OSTF1Q92882 214 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 AGAP4Q96P64 663 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 PRRG3Q9BZD7 231 aa17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 ZNF552Q9H707 407 aaPredicted RBP17.08■□□□□ 0.33
EXOSC3-201ENST00000327304 LOC400499M0QZD8 3231 aa17.08■□□□□ 0.32
EXOSC3-201ENST00000327304 C2orf72A6NCS6 295 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 TAF4O00268 1085 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 NDUFB5O43674 189 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 ADAM11O75078 769 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 WDPCPO95876 746 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 UBL4AP11441 157 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 CD96P40200 585 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 PCYT1AP49585 367 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 GAS1P54826 345 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 TMBIM6P55061 237 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 EFNB1P98172 346 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 OC90Q02509 493 aaPredicted RBP17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 PRAMEF20Q5VT98 475 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 WDR88Q6ZMY6 472 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 LRRC69Q6ZNQ3 347 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 RTL4Q6ZR62 310 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 MDGA2Q7Z553 956 aa17.07■□□□□ 0.32
EXOSC3-201ENST00000327304 FAM26EQ8N5C1 309 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms