RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 RBM24Q9BX46 236 aaKnown RBP15.33■□□□□ 0.04
CLIP4-201ENST00000320081 HYKKA2RU49 373 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 CDHR4A6H8M9 788 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 EGFP01133 1207 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 MYF5P13349 255 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 KIAA0040Q15053 153 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 ANKRD53Q8N9V6 530 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 NUP50Q9UKX7 468 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 MAB21L2Q9Y586 359 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 RABIFP47224 123 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 EPHA5P54756 1037 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 ACTA2P62736 377 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 ACTG2P63267 376 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 KIAA1211LQ6NV74 962 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 SLC48A1Q6P1K1 146 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 LRRN1Q6UXK5 716 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 LSRQ86X29 649 aaPredicted RBP15.32■□□□□ 0.04
CLIP4-201ENST00000320081 NR4A3Q92570 626 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 GCDHQ92947 438 aaPredicted RBP15.32■□□□□ 0.04
CLIP4-201ENST00000320081 NXPE2Q96DL1 559 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 MS4A6EQ96DS6 147 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 RBM38Q9H0Z9 239 aaKnown RBP15.32■□□□□ 0.04
CLIP4-201ENST00000320081 SYT4Q9H2B2 425 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 HINT3Q9NQE9 182 aaKnown RBP15.32■□□□□ 0.04
CLIP4-201ENST00000320081 LRIT1Q9P2V4 623 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 RREB1Q92766 1687 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 TRBV5-4A0A0C4DH59 114 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 MPIG6BO95866 241 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 CCR6P51684 374 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 RACK1P63244 317 aaKnown RBP15.32■□□□□ 0.04
CLIP4-201ENST00000320081 INSL4Q14641 139 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.32■□□□□ 0.04
CLIP4-201ENST00000320081 PRAMEF20Q5VT98 475 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 VASNQ6EMK4 673 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 RPL13AP3Q6NVV1 102 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 Q6ZNB5 142 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 GDPGP1Q6ZNW5 385 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 TBC1D20Q96BZ9 403 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 ITPKCQ96DU7 683 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 CNRIP1Q96F85 164 aaPredicted RBP15.32■□□□□ 0.04
CLIP4-201ENST00000320081 ZNF700Q9H0M5 742 aa15.32■□□□□ 0.04
CLIP4-201ENST00000320081 NTN1O95631 604 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 ERP29P30040 261 aaKnown RBP15.31■□□□□ 0.04
CLIP4-201ENST00000320081 LIM2P55344 173 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 FAM109BQ6ICB4 259 aaPredicted RBP15.31■□□□□ 0.04
CLIP4-201ENST00000320081 LACC1Q8IV20 430 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 OR7G2Q8NG99 324 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 DUSP19Q8WTR2 217 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 TMEM234Q8WY98 164 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 HIST1H2AAQ96QV6 131 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 LYSMD1Q96S90 227 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 OR51B6Q9H340 312 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 OR51B4Q9Y5P0 310 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 KNG1P01042 644 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 PTGS2P35354 604 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 SHHQ15465 462 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 RNASE10Q5GAN6 216 aaKnown RBP15.31■□□□□ 0.04
CLIP4-201ENST00000320081 ATAD3CQ5T2N8 411 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 LCN10Q6JVE6 187 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 OR5D18Q8NGL1 313 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 SYNPRQ8TBG9 265 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 OR5B2Q96R09 309 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 CRB3Q9BUF7 120 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 CD93Q9NPY3 652 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 ING1Q9UK53 422 aaPredicted RBP15.31■□□□□ 0.04
CLIP4-201ENST00000320081 NEU3Q9UQ49 428 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 SLC35A3Q9Y2D2 325 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 BDP1A6H8Y1 2624 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 CLUP10909 449 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 PLGLB1Q02325 96 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 MESP2Q0VG99 397 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 C9orf50Q5SZB4 431 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 MFSD12Q6NUT3 480 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 GALNT6Q8NCL4 622 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 TIMM29Q9BSF4 260 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 TAS2R3Q9NYW6 316 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 CACNG2Q9Y698 323 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 SCG5P05408 212 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 UBL4AP11441 157 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 CTHP32929 405 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 REEP5Q00765 189 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 TMEM240Q5SV17 173 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 YOD1Q5VVQ6 348 aaPredicted RBP15.31■□□□□ 0.04
CLIP4-201ENST00000320081 MAMDC2Q7Z304 686 aaPredicted RBP15.31■□□□□ 0.04
CLIP4-201ENST00000320081 BEST3Q8N1M1 668 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 FGF14Q92915 247 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.31■□□□□ 0.04
CLIP4-201ENST00000320081 DKKL1Q9UK85 242 aa15.31■□□□□ 0.04
CLIP4-201ENST00000320081 UBR3Q6ZT12 1888 aa15.3■□□□□ 0.04
CLIP4-201ENST00000320081 A0A0G2JMP0 313 aa15.3■□□□□ 0.04
CLIP4-201ENST00000320081 VSTM2BA6NLU5 285 aa15.3■□□□□ 0.04
CLIP4-201ENST00000320081 HSPA12AO43301 675 aa15.3■□□□□ 0.04
CLIP4-201ENST00000320081 FGF17O60258 216 aa15.3■□□□□ 0.04
CLIP4-201ENST00000320081 IL33O95760 270 aa15.3■□□□□ 0.04
CLIP4-201ENST00000320081 S100A9P06702 114 aaKnown RBP15.3■□□□□ 0.04
CLIP4-201ENST00000320081 PRR35P0CG20 571 aa15.3■□□□□ 0.04
CLIP4-201ENST00000320081 OTX2P32243 289 aa15.3■□□□□ 0.04
CLIP4-201ENST00000320081 TNFRSF17Q02223 184 aa15.3■□□□□ 0.04
CLIP4-201ENST00000320081 C9orf135Q5VTT2 229 aa15.3■□□□□ 0.04
CLIP4-201ENST00000320081 TECPR1Q7Z6L1 1165 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms