RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 DRD5P21918 477 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 CFL1P23528 166 aaKnown RBP13.05□□□□□ -0.32
VRK3-201ENST00000316763 ARL4DP49703 201 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 BAK1Q16611 211 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 PYDC2Q56P42 97 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 SMARCD3Q6STE5 483 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 WDR88Q6ZMY6 472 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 NRARPQ7Z6K4 114 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 RAB43Q86YS6 212 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 CELF2-AS1Q8N7Q2 184 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 OR52R1Q8NGF1 315 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 CDC6Q99741 560 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 DPYSL5Q9BPU6 564 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 ZNF649Q9BS31 505 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 IFT27Q9BW83 186 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 SLC22A4Q9H015 551 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 ATXN7L1Q9ULK2 861 aaPredicted RBP13.05□□□□□ -0.32
VRK3-201ENST00000316763 BAIAP2Q9UQB8 552 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 A0A0A6YYC8 382 aaPredicted RBP13.04□□□□□ -0.32
VRK3-201ENST00000316763 A0A1W2PQ09 198 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 SLC22A31A6NKX4 558 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 FAM183AA6NL82 134 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 RIIAD1A6NNX1 92 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 TMEM150CB9EJG8 249 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 PRR23D1E9PI22 279 aaPredicted RBP13.04□□□□□ -0.32
VRK3-201ENST00000316763 I3L1I5 382 aaPredicted RBP13.04□□□□□ -0.32
VRK3-201ENST00000316763 J3QRE1 110 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 GABRPO00591 440 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 LALBAP00709 142 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 PRR23D2P0DMB1 279 aaPredicted RBP13.04□□□□□ -0.32
VRK3-201ENST00000316763 SAGP10523 405 aaPredicted RBP13.04□□□□□ -0.32
VRK3-201ENST00000316763 CTBP2P56545 445 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 ASAH1Q13510 395 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 CLPPQ16740 277 aaPredicted RBP13.04□□□□□ -0.32
VRK3-201ENST00000316763 ZSWIM7Q19AV6 140 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 NCCRP1Q6ZVX7 275 aaPredicted RBP13.04□□□□□ -0.32
VRK3-201ENST00000316763 KLBQ86Z14 1044 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 SLC43A2Q8N370 569 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 ARIH2OSQ8N7S6 290 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 SYT14Q8NB59 555 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 NEIL3Q8TAT5 605 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 DNAJA4Q8WW22 397 aaPredicted RBP13.04□□□□□ -0.32
VRK3-201ENST00000316763 HDHD5Q9BXW7 423 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 KCNN2Q9H2S1 579 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 ATP13A2Q9NQ11 1180 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 CMC2Q9NRP2 79 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 C20orf141Q9NUB4 165 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 ADAM30Q9UKF2 790 aa13.04□□□□□ -0.32
VRK3-201ENST00000316763 DAPL1A0PJW8 107 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 C12orf71A8MTZ7 269 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 A8MU76 341 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 POLR1CO15160 346 aaPredicted RBP13.03□□□□□ -0.32
VRK3-201ENST00000316763 CHP2O43745 196 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 OR2B3O76000 313 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 CBX7O95931 251 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 TBXA2RP21731 343 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 PTBP1P26599 531 aaKnown RBP eCLIP13.03□□□□□ -0.32
VRK3-201ENST00000316763 FOXK2Q01167 660 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 SLC35F1Q5T1Q4 408 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 METAP1DQ6UB28 335 aaPredicted RBP13.03□□□□□ -0.32
VRK3-201ENST00000316763 ZNF517Q6ZMY9 492 aaPredicted RBP13.03□□□□□ -0.32
VRK3-201ENST00000316763 SPATC1Q76KD6 591 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 GRAMD2AQ8IUY3 354 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 UBQLNLQ8IYU4 475 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 SIRT6Q8N6T7 355 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 DEFB124Q8NES8 71 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 OR1L3Q8NH93 324 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 HOXB13Q92826 284 aaPredicted RBP13.03□□□□□ -0.32
VRK3-201ENST00000316763 LMF2Q9BU23 707 aaKnown RBP13.03□□□□□ -0.32
VRK3-201ENST00000316763 ALG8Q9BVK2 526 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 TRIM2Q9C040 744 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 MOV10Q9HCE1 1003 aaKnown RBP13.03□□□□□ -0.32
VRK3-201ENST00000316763 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.03□□□□□ -0.32
VRK3-201ENST00000316763 BABAM2Q9NXR7 383 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 MRPS33Q9Y291 106 aaKnown RBP13.03□□□□□ -0.32
VRK3-201ENST00000316763 IGHV5-10-1A0A0J9YXX1 117 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 BLACEA4D250 179 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 H0YIG0 161 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 TM4SF5O14894 197 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 CCNKO75909 580 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 RGS9O75916 674 aaPredicted RBP13.03□□□□□ -0.32
VRK3-201ENST00000316763 KRT8P05787 483 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 RNH1P13489 461 aaKnown RBP13.03□□□□□ -0.32
VRK3-201ENST00000316763 RBM34P42696 430 aaKnown RBP13.03□□□□□ -0.32
VRK3-201ENST00000316763 RFX3P48380 749 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 FXYD6P3P58550 94 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 RPS7P62081 194 aaKnown RBP13.03□□□□□ -0.32
VRK3-201ENST00000316763 GALEQ14376 348 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 KLHL12Q53G59 568 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 ZNF614Q8N883 585 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 ZNF501Q96CX3 271 aaPredicted RBP13.03□□□□□ -0.32
VRK3-201ENST00000316763 FOLH1BQ9HBA9 442 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 COMMD3Q9UBI1 195 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 SIGLEC7Q9Y286 467 aa13.03□□□□□ -0.32
VRK3-201ENST00000316763 A0A0B4J2E0 115 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 A0A1B0GX12 115 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 LRRTM2O43300 516 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 SEC14L5O43304 696 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 RNF13O43567 381 aa13.02□□□□□ -0.32
VRK3-201ENST00000316763 SSX4O60224 188 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms