RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 BPIFA2Q96DR5 249 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 MCCC2Q9HCC0 563 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 KCNK6Q9Y257 313 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 SLC35A3Q9Y2D2 325 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 OTOL1A6NHN0 477 aaPredicted RBP12.42□□□□□ -0.42
SKA3-202ENST00000314759 PEX14O75381 377 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 IFNA16P05015 189 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 ADRB1P08588 477 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 NDUFS1P28331 727 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 PEBP1P30086 187 aaKnown RBP12.42□□□□□ -0.42
SKA3-202ENST00000314759 KIAA1024LP59773 190 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 CTAG1AP78358 180 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 TP53I3Q53FA7 332 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 OR4N5Q8IXE1 308 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 ETFBKMTQ8IXQ9 262 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 KCT2Q8NC54 265 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 DOK4Q8TEW6 326 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 SMIM4Q8WVI0 70 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 GCDHQ92947 438 aaPredicted RBP12.42□□□□□ -0.42
SKA3-202ENST00000314759 CACYBPQ9HB71 228 aaKnown RBP12.42□□□□□ -0.42
SKA3-202ENST00000314759 NTMQ9P121 344 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 KIF25Q9UIL4 384 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 AK6Q9Y3D8 172 aaKnown RBP12.42□□□□□ -0.42
SKA3-202ENST00000314759 PLEKHM1Q9Y4G2 1056 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 SYNDIG1LA6NDD5 238 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 FLRT2O43155 660 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 LPLP06858 475 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 KRT33BQ14525 404 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 STK11Q15831 433 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 EIPR1Q53HC9 387 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 MRPL2Q5T653 305 aaKnown RBP12.41□□□□□ -0.42
SKA3-202ENST00000314759 RGS7BPQ6MZT1 257 aaPredicted RBP12.41□□□□□ -0.42
SKA3-202ENST00000314759 C3P1Q6ZMU1 363 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 CACUL1Q86Y37 369 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 UXS1Q8NBZ7 420 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 ELMOD3Q96FG2 381 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 FBXO34Q9NWN3 711 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 KCNE5Q9UJ90 142 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 RIIAD1A6NNX1 92 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 CTDSPLO15194 276 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 NARSO43776 548 aaKnown RBP12.41□□□□□ -0.42
SKA3-202ENST00000314759 GATBO75879 557 aaKnown RBP12.41□□□□□ -0.42
SKA3-202ENST00000314759 TFP02787 698 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 LINC00271P0C7V0 271 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 CEBPBP17676 345 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 NT5EP21589 574 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 TSFMP43897 325 aaKnown RBP12.41□□□□□ -0.42
SKA3-202ENST00000314759 TFAP2EQ6VUC0 442 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 TMPRSS11FQ6ZWK6 438 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 GRASPQ7Z6J2 395 aaPredicted RBP12.41□□□□□ -0.42
SKA3-202ENST00000314759 LRRC25Q8N386 305 aaPredicted RBP12.41□□□□□ -0.42
SKA3-202ENST00000314759 ARL14Q8N4G2 192 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 HDDC3Q8N4P3 179 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 FAM98AQ8NCA5 519 aaKnown RBP12.41□□□□□ -0.42
SKA3-202ENST00000314759 OR4C6Q8NH72 309 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 COQ8AQ8NI60 647 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 HMGB4Q8WW32 186 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 RSPRY1Q96DX4 576 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 SGTBQ96EQ0 304 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 DMRTA2Q96SC8 542 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 OR10A4Q9H209 315 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 CCDC86Q9H6F5 360 aaKnown RBP12.41□□□□□ -0.42
SKA3-202ENST00000314759 MEPEQ9NQ76 525 aaPredicted RBP12.41□□□□□ -0.42
SKA3-202ENST00000314759 CA10Q9NS85 328 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 RPS6KB2Q9UBS0 482 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 NPIPA5A0A0B4J1W7 369 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 NPIPA7E9PJI5 369 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 PEX12O00623 359 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 PPP1R3DO95685 299 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 AGR2O95994 175 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 ADH1CP00326 375 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 THBS1P07996 1170 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 NPIPA8P0DM63 369 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 VEGFCP49767 419 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 RPS11P62280 158 aaKnown RBP eCLIP12.41□□□□□ -0.42
SKA3-202ENST00000314759 PLPP4Q5VZY2 271 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 ALKAL2Q6UX46 152 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 SLC39A5Q6ZMH5 540 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 CMTM4Q8IZR5 234 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 OR2L13Q8N349 312 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 SDR16C5Q8N3Y7 309 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 LGALS14Q8TCE9 139 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 DEFB118Q96PH6 123 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 SEC22CQ9BRL7 303 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 TEX101Q9BY14 249 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 WDR26Q9H7D7 661 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 ZNF275Q9NSD4 429 aaPredicted RBP12.41□□□□□ -0.42
SKA3-202ENST00000314759 HAO2Q9NYQ3 351 aa12.41□□□□□ -0.42
SKA3-202ENST00000314759 PCDHGA9Q9Y5G4 932 aaKnown RBP12.41□□□□□ -0.42
SKA3-202ENST00000314759 OGG1O15527 345 aa12.4□□□□□ -0.42
SKA3-202ENST00000314759 PTP4A3O75365 173 aa12.4□□□□□ -0.42
SKA3-202ENST00000314759 STX11O75558 287 aa12.4□□□□□ -0.42
SKA3-202ENST00000314759 NMBP08949 121 aa12.4□□□□□ -0.42
SKA3-202ENST00000314759 CLTBP09497 229 aa12.4□□□□□ -0.42
SKA3-202ENST00000314759 GDI2P50395 445 aaKnown RBP12.4□□□□□ -0.42
SKA3-202ENST00000314759 GRM7Q14831 915 aa12.4□□□□□ -0.42
SKA3-202ENST00000314759 RPL13AP3Q6NVV1 102 aa12.4□□□□□ -0.42
SKA3-202ENST00000314759 LRFN4Q6PJG9 635 aa12.4□□□□□ -0.42
SKA3-202ENST00000314759 CDK20Q8IZL9 346 aa12.4□□□□□ -0.42
SKA3-202ENST00000314759 MFSD9Q8NBP5 474 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms