RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 TNFAIP8L1Q8WVP5 186 aa16.71■□□□□ 0.27
SPSB4-201ENST00000310546 ING5Q8WYH8 240 aa16.71■□□□□ 0.27
SPSB4-201ENST00000310546 SPHK1Q9NYA1 384 aa16.71■□□□□ 0.27
SPSB4-201ENST00000310546 CCL26Q9Y258 94 aa16.71■□□□□ 0.27
SPSB4-201ENST00000310546 NTNG1Q9Y2I2 539 aa16.71■□□□□ 0.27
SPSB4-201ENST00000310546 HCFC2Q9Y5Z7 792 aa16.71■□□□□ 0.27
SPSB4-201ENST00000310546 SPEGQ15772 3267 aa16.71■□□□□ 0.27
SPSB4-201ENST00000310546 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.7■□□□□ 0.26
SPSB4-201ENST00000310546 CTDSPLO15194 276 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 F12P00748 615 aaPredicted RBP16.7■□□□□ 0.26
SPSB4-201ENST00000310546 CRYBA1P05813 215 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 RORAP35398 523 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 EPHB3P54753 998 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 PRR5P85299 388 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 ELFN2Q5R3F8 820 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 CFAP206Q8IYR0 622 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 MS4A4EQ96PG1 132 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 ZMIZ1Q9ULJ6 1067 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 TRBV23-1A0A0A0MS06 115 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 NAP1L6A6NFF2 107 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 SNRPGP15A8MWD9 76 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 CACNB4O00305 520 aaPredicted RBP16.7■□□□□ 0.26
SPSB4-201ENST00000310546 FOXE1O00358 373 aaPredicted RBP16.7■□□□□ 0.26
SPSB4-201ENST00000310546 MAGEB4O15481 346 aaPredicted RBP16.7■□□□□ 0.26
SPSB4-201ENST00000310546 C8AP07357 584 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 VSIG10L2P0DP72 767 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 NPPBP16860 134 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 SERPINA4P29622 427 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 CLDN12P56749 244 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 BAIAP2L2Q6UXY1 529 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 RBMS3Q6XE24 437 aaKnown RBP16.7■□□□□ 0.26
SPSB4-201ENST00000310546 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.7■□□□□ 0.26
SPSB4-201ENST00000310546 SPAG16Q8N0X2 631 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 OR5J2Q8NH18 312 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 ZNF480Q8WV37 535 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 TCEAL3Q969E4 200 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 LRIG1Q96JA1 1093 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 PGLYRP3Q96LB9 341 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 NEUROD4Q9HD90 331 aa16.7■□□□□ 0.26
SPSB4-201ENST00000310546 SIRT3Q9NTG7 399 aaPredicted RBP16.7■□□□□ 0.26
SPSB4-201ENST00000310546 TMEM200CA6NKL6 621 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 GABARAPH6UMI1 98 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 TSPAN6O43657 245 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 SULT1B1O43704 296 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 SLCO2B1O94956 709 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 S100A9P06702 114 aaKnown RBP16.69■□□□□ 0.26
SPSB4-201ENST00000310546 PRG2P13727 222 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 PDHA2P29803 388 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 ADH7P40394 386 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 TRAM2Q15035 370 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 UBE2NLQ5JXB2 153 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 C2orf73Q8N5S3 287 aaPredicted RBP16.69■□□□□ 0.26
SPSB4-201ENST00000310546 BRIX1Q8TDN6 353 aaKnown RBP16.69■□□□□ 0.26
SPSB4-201ENST00000310546 BARX1Q9HBU1 254 aaPredicted RBP16.69■□□□□ 0.26
SPSB4-201ENST00000310546 RASL12Q9NYN1 266 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 SLC13A4Q9UKG4 626 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 DYRK1BQ9Y463 629 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 ZNF106Q9H2Y7 1883 aaKnown RBP16.69■□□□□ 0.26
SPSB4-201ENST00000310546 GNB5O14775 395 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 AKR7A3O95154 331 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 LAG3P18627 525 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 CCR2P41597 374 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 ADCK2Q7Z695 626 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 OVCA2Q8WZ82 227 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 GPR55Q9Y2T6 319 aaPredicted RBP16.69■□□□□ 0.26
SPSB4-201ENST00000310546 SC5DO75845 299 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 CHRM4P08173 479 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 C1GALT1C1LP0DN25 315 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 SNRPEP62304 92 aaKnown RBP16.69■□□□□ 0.26
SPSB4-201ENST00000310546 COL9A2Q14055 689 aaPredicted RBP16.69■□□□□ 0.26
SPSB4-201ENST00000310546 COL19A1Q14993 1142 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 RBMS2Q15434 407 aaKnown RBP16.69■□□□□ 0.26
SPSB4-201ENST00000310546 ZNF433Q8N7K0 673 aaPredicted RBP16.69■□□□□ 0.26
SPSB4-201ENST00000310546 OR6S1Q8NH40 331 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 STK35Q8TDR2 534 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 TMEM185BQ9H7F4 350 aa16.69■□□□□ 0.26
SPSB4-201ENST00000310546 ZCCHC3Q9NUD5 404 aaKnown RBP16.69■□□□□ 0.26
SPSB4-201ENST00000310546 CDC42EP2O14613 210 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 RNGTTO60942 597 aaKnown RBP16.68■□□□□ 0.26
SPSB4-201ENST00000310546 LRG1P02750 347 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 ASGR2P07307 311 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 NOS3P29474 1203 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 LUMP51884 338 aaPredicted RBP16.68■□□□□ 0.26
SPSB4-201ENST00000310546 RAB33AQ14088 237 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 TRAM1Q15629 374 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 NIPAL3Q6P499 406 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 ZNF620Q6ZNG0 422 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 MEPCEQ7L2J0 689 aaKnown RBP16.68■□□□□ 0.26
SPSB4-201ENST00000310546 C1orf216Q8TAB5 229 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 VOPP1Q96AW1 172 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 ZG16BQ96DA0 208 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 SLC35G5Q96KT7 338 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 IL23AQ9NPF7 189 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 MED17Q9NVC6 651 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 MYEF2Q9P2K5 600 aaKnown RBP16.68■□□□□ 0.26
SPSB4-201ENST00000310546 BRWD1Q9NSI6 2320 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 CDHR4A6H8M9 788 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 NDUFB6O95139 128 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 IFNA4P05014 189 aa16.68■□□□□ 0.26
SPSB4-201ENST00000310546 NDUFV2P19404 249 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms