RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CFL1P23528 166 aaKnown RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 HLA-DMAP28067 261 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 TEAD1P28347 426 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 IMPA1P29218 277 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 TGFBR1P36897 503 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 ACTR1BP42025 376 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 CRATP43155 626 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 IDH2P48735 452 aaKnown RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 PRLHRP49683 370 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 GFERP55789 205 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 ACTR1AP61163 376 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 HBA1P69905 142 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 PSPHP78330 225 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 ILF3Q12906 894 aaKnown RBP eCLIP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 KLRB1Q12918 225 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 GAB1Q13480 694 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 NAE1Q13564 534 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 C1DQ13901 141 aaKnown RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 LARS2Q15031 903 aaKnown RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 SPHARQ15513 63 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 SSX1Q16384 188 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 TSTQ16762 297 aaKnown RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 TMEM44Q2T9K0 475 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 BCL7AQ4VC05 210 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 KLHL22Q53GT1 634 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 PRR30Q53SZ7 412 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 FAM209AQ5JX71 171 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF362Q5T0B9 420 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 DCAF12Q5T6F0 453 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 HENMT1Q5T8I9 393 aaKnown RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 MFSD4BQ5TF39 518 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 RSBN1Q5VWQ0 802 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 TIGD3Q6B0B8 471 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 TMPRSS11AQ6ZMR5 421 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF517Q6ZMY9 492 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 ADGRG3Q86Y34 549 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 SNX29P2Q8IUI4 249 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 SLC22A15Q8IZD6 547 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 RDH10Q8IZV5 341 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 TAGAPQ8N103 731 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 NANOGP1Q8N7R0 232 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 FAM83FQ8NEG4 500 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 LILRB4Q8NHJ6 448 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 HUS1BQ8NHY5 278 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 GRPEL2Q8TAA5 225 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 UTP15Q8TED0 518 aaKnown RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 C16orf78Q8WTQ4 265 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 SLC25A43Q8WUT9 341 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 SKA2Q8WVK7 121 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 C17orf50Q8WW18 174 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 APOBEC4Q8WW27 367 aaKnown RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 OR5P2Q8WZ92 322 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 PPCDCQ96CD2 204 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 NEURL3Q96EH8 262 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 ZC3HAV1LQ96H79 300 aaKnown RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 COX14Q96I36 57 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF514Q96K75 400 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 OPALINQ96PE5 141 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 OR2A14Q96R47 310 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 MTERF1Q99551 399 aaKnown RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 NIPSNAP1Q9BPW8 284 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 CHCHD6Q9BRQ6 235 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 SLC35A5Q9BS91 424 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 CENPOQ9BU64 300 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 EBPLQ9BY08 206 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 POLDIP3Q9BY77 421 aaKnown RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 GSDMCQ9BYG8 508 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 NLNQ9BYT8 704 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 SLC22A4Q9H015 551 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 ATG10Q9H0Y0 220 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 TP63Q9H3D4 680 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 TPK1Q9H3S4 243 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 NMNAT1Q9HAN9 279 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 HHATLQ9HCP6 504 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 PHPT1Q9NRX4 125 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 TMEM184CQ9NVA4 438 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 NDUFB11Q9NX14 153 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 AHSPQ9NZD4 102 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 TBC1D29Q9UFV1 150 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 ACAD8Q9UKU7 415 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 TBC1D24Q9ULP9 559 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 SSR3Q9UNL2 185 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 DIMT1Q9UNQ2 313 aaKnown RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 EXO1Q9UQ84 846 aaKnown RBP4.51□□□□□ -1.69
CKS1B-201ENST00000308987 ASB4Q9Y574 426 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 N6AMT1Q9Y5N5 214 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 C17orf113A0A1B0GUU1 675 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 A0A1W2PRB8 838 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 A0A1W2PRQ8 180 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 TMEM129A0AVI4 362 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 A1L4Q6 167 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 CTDSP2O14595 271 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 PCDH17O14917 1159 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 PROM1O43490 865 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 TPST2O60704 377 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 HCN1O60741 890 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ENTPD6O75354 484 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 GPX5O75715 221 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ETHE1O95571 254 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms