RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CCDC28BQ9BUN5 200 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 ACTR6Q9GZN1 396 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 DLL4Q9NR61 685 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 RLIMQ9NVW2 624 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 OSGIN1Q9UJX0 560 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 GPR52Q9Y2T5 361 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 IGKV3D-15A0A087WSY6 115 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 TRBV5-3A0A0A0MS03 114 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 ZNF724A8MTY0 619 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 SASH3O75995 380 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 DBIP07108 87 aaKnown RBP17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 FESP07332 822 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 PPP3CBP16298 524 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 OR3A2P47893 321 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 ANXA11P50995 505 aaKnown RBP17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 DSTNP60981 165 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 H3F3AP84243 136 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 TSC22D1Q15714 1073 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 RPS26P11Q5JNZ5 115 aaPredicted RBP17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 LRIF1Q5T3J3 769 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 ZNF563Q8TA94 476 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 TMEM19Q96HH6 336 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 REXO5Q96IC2 774 aaKnown RBP17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 TMEM204Q9BSN7 226 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 ADAM19Q9H013 955 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 RMND5AQ9H871 391 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 SERINC1Q9NRX5 453 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 KLHL9Q9P2J3 617 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 P2RX2Q9UBL9 471 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 GMEB1Q9Y692 573 aa17.58■□□□□ 0.4
PDZRN3-202ENST00000308537 ZC3H12DA2A288 527 aaKnown RBP17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 SULT2B1O00204 365 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 POLR3GO15318 223 aaPredicted RBP17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 PMS2P2O95744 297 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 BCHEP06276 602 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 IMPDH2P12268 514 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 HOXC12P31275 282 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 AQP5P55064 265 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 RASGEF1BQ0VAM2 473 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 KEAP1Q14145 624 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 RGNQ15493 299 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 PAGE3Q5JUK9 113 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 SFRP5Q5T4F7 317 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 MTDHQ86UE4 582 aaKnown RBP17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 STK32CQ86UX6 486 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 CKAP2Q8WWK9 683 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 S100PBPQ96BU1 408 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 DNAJA3Q96EY1 480 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 PRSS50Q9UI38 385 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 HDGFL3Q9Y3E1 203 aa17.57■□□□□ 0.4
PDZRN3-202ENST00000308537 TMED7-TICAM2A0A0A6YYA0 188 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 TMEM72A0PK05 275 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 HMGB1P1B2RPK0 211 aaPredicted RBP17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 PLAUP00749 431 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 GKN3PP0CG01 181 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 IL7RP16871 459 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 TACR3P29371 465 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 SLC1A3P43003 542 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 CRATP43155 626 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 CLK1P49759 484 aaKnown RBP17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 SLC16A1P53985 500 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 FOXD4Q12950 439 aaPredicted RBP17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 PDK3Q15120 406 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 C6orf10Q5SRN2 563 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 RNF220Q5VTB9 566 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 CLIP4Q8N3C7 705 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 WFDC11Q8NEX6 87 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 OR52P1PQ8NH57 321 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 STON2Q8WXE9 905 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 ZNF775Q96BV0 537 aaPredicted RBP17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 TACO1Q9BSH4 297 aaKnown RBP17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 IKZF5Q9H5V7 419 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 ZNF385DQ9H6B1 395 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 BCL2L10Q9HD36 194 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 EDARQ9UNE0 448 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 TMED7Q9Y3B3 224 aa17.56■□□□□ 0.4
PDZRN3-202ENST00000308537 A0A096LPI6 279 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 CFAP73A6NFT4 308 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 CLIC1O00299 241 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 ZNF208O43345 1280 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 DNPH1O43598 174 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 ANP32DO95626 131 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 PRG2P13727 222 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 COX5AP20674 150 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 CRISP3P54108 245 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 PPP2R2AP63151 447 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 CSNK2A1P68400 391 aaPredicted RBP17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 TAB1Q15750 504 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 BEX5Q5H9J7 111 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 Q6ZT83 130 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 PEX5LQ8IYB4 626 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 MAL2Q969L2 176 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 A4GALTQ9NPC4 353 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 BEX4Q9NWD9 120 aaPredicted RBP17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 VAPAQ9P0L0 249 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 TRAPPC4Q9Y296 219 aa17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 ZNF443Q9Y2A4 671 aaPredicted RBP17.55■□□□□ 0.4
PDZRN3-202ENST00000308537 SPIN1Q9Y657 262 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms