RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 TMED9Q9BVK6 235 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 HDHD2Q9H0R4 259 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 GHITMQ9H3K2 345 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 EGLN3Q9H6Z9 239 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 ZFP64Q9NPA5 681 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 OR6C2Q9NZP2 312 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 EXTL2Q9UBQ6 330 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 PCOLCE2Q9UKZ9 415 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 SIT1Q9Y3P8 196 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 HNRNPCL2B2RXH8 293 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 CASC3O15234 703 aaKnown RBP9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 ERI3O43414 337 aaKnown RBP9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 EPPINO95925 133 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 NR2F1P10589 423 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 CELP19835 753 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 STOMP27105 288 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 CD38P28907 300 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 RBMS1P29558 406 aaKnown RBP9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 CMPK1P30085 196 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 LSSP48449 732 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 RNF144AP50876 292 aaPredicted RBP9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 CDH11P55287 796 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 MAZP56270 477 aaKnown RBP9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 SHC2P98077 582 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 CSTF1Q05048 431 aaKnown RBP9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 TUSC1Q2TAM9 212 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 CD276Q5ZPR3 534 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 VASNQ6EMK4 673 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 ZNF793Q6ZN11 406 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 TMEM91Q6ZNR0 172 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 PARGQ86W56 976 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 OR8D4Q8NGM9 314 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 OR6T1Q8NGN1 323 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 SLC35G5Q96KT7 338 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 THAP7Q9BT49 309 aaPredicted RBP9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 RAB11FIP5Q9BXF6 653 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 GSDMCQ9BYG8 508 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 OR51I1Q9H343 314 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 SDHAF2Q9NX18 166 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 EPHA6Q9UF33 1036 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 GPN3Q9UHW5 284 aaPredicted RBP9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 A0A087WUU8 490 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 LINC01387J3KSC0 135 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 AGRPO00253 132 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 RGS9O75916 674 aaPredicted RBP9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 AHCYP23526 432 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 PPM1FP49593 454 aaPredicted RBP9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 ARHGDIBP52566 201 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 HSPB3Q12988 150 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 PABPC1L2AQ5JQF8 200 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 HBMQ6B0K9 141 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 GJD3Q8N144 294 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 SPEM1Q8N4L4 309 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 CAMKVQ8NCB2 501 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 MAFAQ8NHW3 353 aaPredicted RBP9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 EXOSC8Q96B26 276 aaKnown RBP9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 LINC00052Q96N35 136 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 OR2M2Q96R28 347 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 PINK1Q9BXM7 581 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 ZNF436Q9C0F3 470 aaPredicted RBP9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 BIN3Q9NQY0 253 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 HRASLS2Q9NWW9 162 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 GPR52Q9Y2T5 361 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 NUBP2Q9Y5Y2 271 aa9.55□□□□□ -0.88
APOBEC3F-201ENST00000308521 C2orf72A6NCS6 295 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 CTSVO60911 334 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 ANXA3P12429 323 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 UGT2B7P16662 529 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 ZNF3P17036 446 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 NDUFS1P28331 727 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 HTR1FP30939 366 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 STAT5AP42229 794 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 SSR2P43308 183 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 CXCL12P48061 93 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 LSM11P83369 360 aaKnown RBP eCLIP9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 PRAMEF8Q5VWM4 474 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 PRAMEF7Q5VXH5 474 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 FBXO42Q6P3S6 717 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 SHFQ7M4L6 423 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 ARL6IP6Q8N6S5 226 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 LMX1AQ8TE12 382 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 ZDHHC1Q8WTX9 485 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 SPRYD4Q8WW59 207 aaPredicted RBP9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 RGMAQ96B86 450 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 NXPE2Q96DL1 559 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 RBP7Q96R05 134 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 TEX12Q9BXU0 123 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 ANKRD19PQ9H560 264 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 TTC28Q96AY4 2481 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 NINQ8N4C6 2090 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 A0A0G2JPF8 293 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 TMEM82A0PJX8 343 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 SLC22A23A1A5C7 686 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 CD8B2A6NJW9 211 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 HNRNPCL3B7ZW38 293 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 GTPBP1O00178 669 aaKnown RBP9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 SYT5O00445 386 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 SURF4O15260 269 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 HNRNPCL4P0DMR1 293 aa9.54□□□□□ -0.88
APOBEC3F-201ENST00000308521 ALPPL2P10696 532 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms