RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 GKN3PP0CG01 181 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 PSMB1P20618 241 aaKnown RBP15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 RPS4Y1P22090 263 aaKnown RBP15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 TACR3P29371 465 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 ZNF836Q6ZNA1 936 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 ADGRG3Q86Y34 549 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 ZNF100Q8IYN0 542 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 GABRG1Q8N1C3 465 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 CADM2Q8N3J6 435 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 STEAP2Q8NFT2 490 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 SLC38A5Q8WUX1 472 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 GTF2H4Q92759 462 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 KISS1RQ969F8 398 aaPredicted RBP15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 PLPPR2Q96GM1 343 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 TMEM19Q96HH6 336 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 CALML5Q9NZT1 146 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 CCDC167Q9P0B6 97 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 ING1Q9UK53 422 aaPredicted RBP15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 PCDHB14Q9Y5E9 798 aa15.13■□□□□ 0.01
HMGCLL1-202ENST00000308161 HMGB1P1B2RPK0 211 aaPredicted RBP15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 GCM2O75603 506 aaPredicted RBP15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 NUDT7P0C024 238 aa15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 TFPTP0C1Z6 253 aa15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 EDNRAP25101 427 aa15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 HTR3AP46098 478 aa15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 POLR2HP52434 150 aaKnown RBP15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 ADAM8P78325 824 aa15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 FOXD4Q12950 439 aaPredicted RBP15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 CAPRIN1Q14444 709 aaKnown RBP15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 LIN52Q52LA3 116 aa15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 SFRP5Q5T4F7 317 aa15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 AP1ARQ63HQ0 302 aa15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 GALNT5Q7Z7M9 940 aa15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 MTDHQ86UE4 582 aaKnown RBP15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 CCL19Q99731 98 aa15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 PAIP1Q9H074 479 aaKnown RBP15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 EMC3Q9P0I2 261 aa15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 OSGIN1Q9UJX0 560 aa15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 ZNF443Q9Y2A4 671 aaPredicted RBP15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 HDGFL3Q9Y3E1 203 aa15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 MTORP42345 2549 aa15.12■□□□□ 0.01
HMGCLL1-202ENST00000308161 TMEM72A0PK05 275 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 ZNF814B7Z6K7 855 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 CLIC1O00299 241 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 KLF4O43474 513 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 LYZL6O75951 148 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 IGHV3-9P01782 118 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 LOXP28300 417 aaPredicted RBP15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 MAGEA8P43361 318 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 OR3A2P47893 321 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 EPS8Q12929 822 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 LARS2Q15031 903 aaKnown RBP15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 STK11Q15831 433 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 ACKR1Q16570 336 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 ZNF704Q6ZNC4 412 aaPredicted RBP15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 CCDC103Q8IW40 242 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 UBE2J2Q8N2K1 259 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 WFDC11Q8NEX6 87 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 MAL2Q969L2 176 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 DDIT4LQ96D03 193 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 SPDL1Q96EA4 605 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 CCDC28BQ9BUN5 200 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 TMUB1Q9BVT8 246 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 HDHD5Q9BXW7 423 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 BEX4Q9NWD9 120 aaPredicted RBP15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 FREM1Q5H8C1 2179 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 VPS13CQ709C8 3753 aa15.11■□□□□ 0.01
HMGCLL1-202ENST00000308161 A0A096LPI6 279 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 ZC3H12DA2A288 527 aaKnown RBP15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 CDHR4A6H8M9 788 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 ZNF724A8MTY0 619 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 C5orf58C9J3I9 102 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 SMPD2O60906 423 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 PMS2P2O95744 297 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 PLAUP00749 431 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 NCF2P19878 526 aaPredicted RBP15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 FPR1P21462 350 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 SLC1A3P43003 542 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 COPZ1P61923 177 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 NKX6-1P78426 367 aaPredicted RBP15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 ITGADQ13349 1161 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 RGNQ15493 299 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 TAB1Q15750 504 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 AGKQ53H12 422 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 ABLIM2Q6H8Q1 611 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 BHLHA15Q7RTS1 189 aaPredicted RBP15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 FUNDC1Q8IVP5 155 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 ZNF440Q8IYI8 595 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 CLIP4Q8N3C7 705 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 PIGXQ8TBF5 258 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 PMM1Q92871 262 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 RAD21L1Q9H4I0 556 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 THUMPD1Q9NXG2 353 aaKnown RBP15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 TMEM181Q9P2C4 612 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 ZNF232Q9UNY5 417 aa15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 NOSIPQ9Y314 301 aaKnown RBP15.1■□□□□ 0.01
HMGCLL1-202ENST00000308161 DSPPQ9NZW4 1301 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 ZNF469Q96JG9 3925 aaPredicted RBP15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 A0A0G2JPF8 293 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 HNRNPCL2B2RXH8 293 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms