RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 TEX101Q9BY14 249 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 GLIPR2Q9H4G4 154 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF226Q9NYT6 803 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 WDR37Q9Y2I8 494 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 NPFFR2Q9Y5X5 522 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 NRXN2Q9P2S2 1712 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 TNFSF14O43557 240 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 FURINP09958 794 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 ROR2Q01974 943 aaKnown RBP9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 TP53I3Q53FA7 332 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 DPAGT1Q9H3H5 408 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC6A20Q9NP91 592 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 PLEKHJ1Q9NW61 149 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC23A2Q9UGH3 650 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 COL4A5P29400 1685 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 FIGNL2A6NMB9 653 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 NME1P15531 152 aaKnown RBP9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 RBM34P42696 430 aaKnown RBP9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 KMT5CQ86Y97 462 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 CHTF18Q8WVB6 975 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 C1QTNF6Q9BXI9 259 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 C1QTNF2Q9BXJ5 285 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF350Q9GZX5 532 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF71Q9NQZ8 489 aaPredicted RBP9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC5A10A0PJK1 596 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC1A7O00341 560 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 SFTPBP07988 381 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC48A1Q6P1K1 146 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 H1FXQ92522 213 aaKnown RBP9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 MEPEQ9NQ76 525 aaPredicted RBP9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 KLHL9Q9P2J3 617 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 HPRP00739 348 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC1A3P43003 542 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 GPR139Q6DWJ6 353 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 RAB39BQ96DA2 213 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 ALG8Q9BVK2 526 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 POLE3Q9NRF9 147 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 CCNKO75909 580 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 WFDC8Q8IUA0 241 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 OR5D14Q8NGL3 314 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 VAPAQ9P0L0 249 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 LRRN3E7EW58 273 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 TRAPPC2LH3BP13 241 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 NME4O00746 187 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 GPX3P22352 226 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 PITPNBP48739 271 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 LTC4SQ16873 150 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 VASH2Q86V25 355 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 PDSS2Q86YH6 399 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 ELMOD2Q8IZ81 293 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 APH1AQ96BI3 265 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 GPR45Q9Y5Y3 372 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 CENPBD1B2RD01 187 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 IGLV3-25P01717 112 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 PRSS36Q5K4E3 855 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC22A25Q6T423 547 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC46A3Q7Z3Q1 461 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC22A4Q9H015 551 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 KIF13BQ9NQT8 1826 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 ZSCAN5BA6NJL1 495 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 DPM1O60762 260 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF44P15621 663 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 COL9A1P20849 921 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 EIF3IQ13347 325 aaKnown RBP9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 MOGQ16653 247 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 ZFP69Q49AA0 526 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 TBC1D15Q8TC07 691 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 COPZ2Q9P299 210 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 PROCRQ9UNN8 238 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 LHX6Q9UPM6 363 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 PTPRZ1P23471 2315 aaPredicted RBP9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 HRO43593 1189 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 CRYABP02511 175 aaKnown RBP9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 UCHL1P09936 223 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 METAP1P53582 386 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 TREX2Q9BQ50 279 aaPredicted RBP9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 RDH8Q9NYR8 311 aa9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 NKX1-2Q9UD57 310 aaPredicted RBP9.93□□□□□ -0.82
SYNPO2-201ENST00000307142 K7EQS6 105 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC19A2O60779 497 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 RBBP9O75884 186 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 OR2J2O76002 312 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 EVI2BP34910 448 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 RBMXP38159 391 aaKnown RBP9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 RAD52P43351 418 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 KIR2DL3P43628 341 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 VEZF1Q14119 521 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF791Q3KP31 576 aaPredicted RBP9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 PODNL1Q6PEZ8 512 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 THAP6Q8TBB0 222 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 SARAFQ96BY9 339 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 ENAMQ9NRM1 1142 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 B3GNT2Q9NY97 397 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 J3KTA2 159 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 M0R1B8 84 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 NSA2O95478 260 aaKnown RBP9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 CBX7O95931 251 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 MT-ND2P03891 347 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 CD40LGP29965 261 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms