RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 OR8G3PP0DMU2 310 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 CRYBB2P43320 205 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 DLX5P56178 289 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 ACTBP60709 375 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 PRPS1P60891 318 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 EIF5AP63241 154 aaKnown RBP12.35□□□□□ -0.43
DDX54-201ENST00000306014 ACTG1P63261 375 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 AIMP2Q13155 320 aaKnown RBP12.35□□□□□ -0.43
DDX54-201ENST00000306014 MAPK14Q16539 360 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 FXNQ16595 210 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 DUSP6Q16828 381 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 MFSD12Q6NUT3 480 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 RNF113BQ8IZP6 322 aaKnown RBP12.35□□□□□ -0.43
DDX54-201ENST00000306014 PFN4Q8NHR9 129 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 GPR148Q8TDV2 347 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 NXPE3Q969Y0 559 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 ARHGAP9Q9BRR9 750 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 GPR174Q9BXC1 333 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 SYT4Q9H2B2 425 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 PLEKHM1Q9Y4G2 1056 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 MIA3Q5JRA6 1907 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 A0A0A6YYC8 382 aaPredicted RBP12.34□□□□□ -0.43
DDX54-201ENST00000306014 I3L1I5 382 aaPredicted RBP12.34□□□□□ -0.43
DDX54-201ENST00000306014 HRO43593 1189 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 PRAMEF4O60810 478 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 SQSTM1Q13501 440 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 TCTE1Q5JU00 501 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 PRAMEF9Q5VWM5 478 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 RPL22L1Q6P5R6 122 aaKnown RBP12.34□□□□□ -0.43
DDX54-201ENST00000306014 SMAP2Q8WU79 429 aaPredicted RBP12.34□□□□□ -0.43
DDX54-201ENST00000306014 PDCD1LG2Q9BQ51 273 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 SFXN1Q9H9B4 322 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 PTTG3PQ9NZH4 202 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 TRAPPC4Q9Y296 219 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 MEMO1Q9Y316 297 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 RAB3DO95716 219 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 GPR75O95800 540 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 CTSLP07711 333 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 LIPCP11150 499 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 AGTR1P30556 359 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 RIDAP52758 137 aaKnown RBP12.34□□□□□ -0.43
DDX54-201ENST00000306014 GPR50Q13585 617 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 OPCMLQ14982 345 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 METRNLQ641Q3 311 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 ZNF620Q6ZNG0 422 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 ESPNLQ6ZVH7 1005 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 GOT1L1Q8NHS2 421 aaPredicted RBP12.34□□□□□ -0.43
DDX54-201ENST00000306014 FOXN4Q96NZ1 517 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 FN3KQ9H479 309 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 POLMQ9NP87 494 aaPredicted RBP12.34□□□□□ -0.43
DDX54-201ENST00000306014 SLC23A2Q9UGH3 650 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 TESQ9UGI8 421 aaKnown RBP12.34□□□□□ -0.43
DDX54-201ENST00000306014 EGFP01133 1207 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 ITGA5P08648 1049 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 AKR1C4P17516 323 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 NTSR1P30989 418 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 EPHA5P54756 1037 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 OR10A3P58181 314 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 TNFRSF17Q02223 184 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 GRM7Q14831 915 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 FAM27D1Q5T7N8 215 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 EIF5AL1Q6IS14 154 aaKnown RBP12.34□□□□□ -0.43
DDX54-201ENST00000306014 MFSD9Q8NBP5 474 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 GPR32P1Q8NGA4 272 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 OR4C15Q8NGM1 316 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 NMNAT3Q96T66 252 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 TEAD3Q99594 435 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 TIMM29Q9BSF4 260 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 ZNF436Q9C0F3 470 aaPredicted RBP12.34□□□□□ -0.43
DDX54-201ENST00000306014 CA5BQ9Y2D0 317 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 SCGB1D2O95969 90 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 CD34P28906 385 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 GZMMP51124 257 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 GXYLT1Q4G148 440 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 ADGRF3Q8IZF5 1079 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 DEFB119Q8N690 84 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 PNLDC1Q8NA58 520 aaKnown RBP12.34□□□□□ -0.43
DDX54-201ENST00000306014 FGF13Q92913 245 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 MS4A6EQ96DS6 147 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 MED30Q96HR3 178 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 NOX4Q9NPH5 578 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 TBX21Q9UL17 535 aa12.34□□□□□ -0.43
DDX54-201ENST00000306014 TMEM72A0PK05 275 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 MAGEB4O15481 346 aaPredicted RBP12.33□□□□□ -0.44
DDX54-201ENST00000306014 IGHA2P01877 340 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 H2BFMP0C1H6 154 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 UGT2B7P16662 529 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 DUSP5Q16690 384 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 ZNF417Q8TAU3 575 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 RBP7Q96R05 134 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 ZBP1Q9H171 429 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 ANKRD19PQ9H560 264 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 PLCL2Q9UPR0 1127 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 A0A1B0GWA3 101 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 GPR89AB7ZAQ6 455 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 TLX3O43711 291 aaPredicted RBP12.33□□□□□ -0.44
DDX54-201ENST00000306014 F13BP05160 661 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 GPR89BP0CG08 455 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 BTG1P62324 171 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 GK2Q14410 553 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms