RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 DTX4Q9Y2E6 619 aa11.9□□□□□ -0.5
HIF3A-204ENST00000300862 PCDHGB7Q9Y5F8 929 aa11.9□□□□□ -0.5
HIF3A-204ENST00000300862 A0A087WV62 115 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 A0A0B4J203 849 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 A0A1W2PRG6 482 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 RIIAD1A6NNX1 92 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 C2orf74A8MZ97 194 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 IMPA2O14732 288 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 MT-ND5P03915 603 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 POU3F3P20264 500 aaPredicted RBP11.89□□□□□ -0.51
HIF3A-204ENST00000300862 SDHBP21912 280 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 AGFG1P52594 562 aaKnown RBP11.89□□□□□ -0.51
HIF3A-204ENST00000300862 CRYZQ08257 329 aaKnown RBP11.89□□□□□ -0.51
HIF3A-204ENST00000300862 SLC25A35Q3KQZ1 300 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 RNASE12Q5GAN4 147 aaKnown RBP11.89□□□□□ -0.51
HIF3A-204ENST00000300862 EXOSC6Q5RKV6 272 aaKnown RBP11.89□□□□□ -0.51
HIF3A-204ENST00000300862 MZT2BQ6NZ67 158 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 BPHLQ86WA6 291 aaPredicted RBP11.89□□□□□ -0.51
HIF3A-204ENST00000300862 LRRC17Q8N6Y2 441 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 DUSP18Q8NEJ0 188 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 SDR9C7Q8NEX9 313 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 OR4K13Q8NH42 304 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 SLC37A2Q8TED4 501 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 ZMYND19Q96E35 227 aaPredicted RBP11.89□□□□□ -0.51
HIF3A-204ENST00000300862 JAM3Q9BX67 310 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 NARFLQ9H6Q4 476 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 GALNT9Q9HCQ5 603 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 SLC35A3Q9Y2D2 325 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 NOS1APO75052 506 aaPredicted RBP11.89□□□□□ -0.51
HIF3A-204ENST00000300862 PTP4A3O75365 173 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 HOXC4P09017 264 aaPredicted RBP11.89□□□□□ -0.51
HIF3A-204ENST00000300862 ARSBP15848 533 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 MAP3K8P41279 467 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 MTNR1BP49286 362 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 RRAS2P62070 204 aaPredicted RBP11.89□□□□□ -0.51
HIF3A-204ENST00000300862 PSG6Q00889 435 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 TP53I3Q53FA7 332 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 TOR2AQ5JU69 321 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 SLC22A18ASQ8N1D0 253 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 OR52E2Q8NGJ4 325 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 RPLP0P6Q8NHW5 317 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 ABHD4Q8TB40 342 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 RSC1A1Q92681 617 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 STACQ99469 402 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 HCN3Q9P1Z3 774 aa11.89□□□□□ -0.51
HIF3A-204ENST00000300862 A0A0B4J2E0 115 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 A0A1B0GX12 115 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 SLC22A31A6NKX4 558 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 ST6GAL1P15907 406 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 THBS2P35442 1172 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 NAA10P41227 235 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-204ENST00000300862 ADAM15Q13444 863 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 ESCO2Q56NI9 601 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 ALG10BQ5I7T1 473 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 HBMQ6B0K9 141 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 METAP1DQ6UB28 335 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-204ENST00000300862 TRILQ7L0X0 811 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 SLC44A3Q8N4M1 653 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 HMGB4Q8WW32 186 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 CTHRC1Q96CG8 243 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 ERMAPQ96PL5 475 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-204ENST00000300862 KCNJ15Q99712 375 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 TRAF4Q9BUZ4 470 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-204ENST00000300862 MCCC2Q9HCC0 563 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 ING3Q9NXR8 418 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 TEKT2Q9UIF3 430 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 SDK1Q7Z5N4 2213 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 A0A0A6YYC8 382 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-204ENST00000300862 TCRBV21S2A2A0A5A6 115 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 I3L1I5 382 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-204ENST00000300862 SHOXO15266 292 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 DRD5P21918 477 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 ACAA2P42765 397 aaKnown RBP11.88□□□□□ -0.51
HIF3A-204ENST00000300862 SRP9P49458 86 aaKnown RBP11.88□□□□□ -0.51
HIF3A-204ENST00000300862 LBX1P52954 281 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 MAT1AQ00266 395 aaKnown RBP11.88□□□□□ -0.51
HIF3A-204ENST00000300862 BDH1Q02338 343 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 SFXN4Q6P4A7 337 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 GLRX5Q86SX6 157 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 C9orf62Q8N4C0 152 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 OR5M3Q8NGP4 307 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 GHSRQ92847 366 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 SPACA7Q96KW9 195 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 MARVELD1Q9BSK0 173 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.88□□□□□ -0.51
HIF3A-204ENST00000300862 ERVMER34-1Q9H9K5 563 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 WSB2Q9NYS7 404 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-204ENST00000300862 KCNN3Q9UGI6 736 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 ADAM18Q9Y3Q7 739 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 HEATR5AQ86XA9 2040 aa11.88□□□□□ -0.51
HIF3A-204ENST00000300862 A0A0J9YY10 115 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 SLC9B1P1A6NJY1 282 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 TGFBR3LH3BV60 316 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 SLC19A2O60779 497 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 MTRF1O75570 445 aaKnown RBP11.87□□□□□ -0.51
HIF3A-204ENST00000300862 SERPINI2O75830 405 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 UBL4AP11441 157 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 ZNF3P17036 446 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 M6PRP20645 277 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 SLC2A5P22732 501 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms