RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ATCAYQ86WG3 371 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 LAS2Q8IYD9 372 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 GALNT11Q8NCW6 608 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 OR8D4Q8NGM9 314 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 TMEM41AQ96HV5 264 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 ZFYVE21Q9BQ24 234 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 TAPBPLQ9BX59 468 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 AUNIPQ9H7T9 357 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 PLEKHA1Q9HB21 404 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 KLHL9Q9P2J3 617 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 A0A1B0GVI7 797 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 A0A1B0GWA3 101 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 CDC20Q12834 499 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 ARHGAP40Q5TG30 622 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 ALKBH2Q6NS38 261 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 DPY19L4Q7Z388 723 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 LRRC28Q86X40 367 aaPredicted RBP12.35□□□□□ -0.43
CASC4-201ENST00000299957 FAM109AQ8N4B1 249 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 TBC1D20Q96BZ9 403 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 CPNE2Q96FN4 548 aaPredicted RBP12.35□□□□□ -0.43
CASC4-201ENST00000299957 EVA1BQ9NVM1 165 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 ACTR10Q9NZ32 417 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 E9PI62 339 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 F5H0A9 414 aaPredicted RBP12.35□□□□□ -0.43
CASC4-201ENST00000299957 NDUFS1P28331 727 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 MLLT3P42568 568 aaPredicted RBP12.35□□□□□ -0.43
CASC4-201ENST00000299957 RAB12Q6IQ22 244 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 OR4Q3Q8NH05 313 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 RAB7BQ96AH8 199 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 Q96M85 177 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 TEAD3Q99594 435 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 C1QTNF6Q9BXI9 259 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 OR52A5Q9H2C5 316 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 CCDC86Q9H6F5 360 aaKnown RBP12.35□□□□□ -0.43
CASC4-201ENST00000299957 TREM1Q9NP99 234 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 C20orf141Q9NUB4 165 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 APOBEC3BQ9UH17 382 aaKnown RBP12.35□□□□□ -0.43
CASC4-201ENST00000299957 CACNA1DQ01668 2161 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 C2orf72A6NCS6 295 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 NRG2O14511 850 aaPredicted RBP12.34□□□□□ -0.43
CASC4-201ENST00000299957 LIMS3P0CW19 117 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 LIMS4P0CW20 117 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 AKR1C4P17516 323 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 ANXA7P20073 488 aaKnown RBP12.34□□□□□ -0.43
CASC4-201ENST00000299957 NPR2P20594 1047 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 HOXD11P31277 338 aaPredicted RBP12.34□□□□□ -0.43
CASC4-201ENST00000299957 ARRB1P49407 418 aaPredicted RBP12.34□□□□□ -0.43
CASC4-201ENST00000299957 ART1P52961 327 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 RPS15AP62244 130 aaKnown RBP12.34□□□□□ -0.43
CASC4-201ENST00000299957 PDE7AQ13946 482 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 GRM7Q14831 915 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 METRNLQ641Q3 311 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 OR7E24Q6IFN5 339 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 SLC48A1Q6P1K1 146 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 KLHL24Q6TFL4 600 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 OR2A1Q8NGT9 310 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 NXPE2Q96DL1 559 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.34□□□□□ -0.43
CASC4-201ENST00000299957 NUP50Q9UKX7 468 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 LTBP1Q14766 1721 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 TCRBV21S2A2A0A5A6 115 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 AMY2AP04746 511 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 DDOSTP39656 456 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 ZNF227Q86WZ6 799 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 ZNF619Q8N2I2 560 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 LINC01555Q8NAE3 123 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 ACOT12Q8WYK0 555 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 NOX3Q9HBY0 568 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 ACOXLQ9NUZ1 547 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 ZNF346Q9UL40 294 aaKnown RBP12.34□□□□□ -0.43
CASC4-201ENST00000299957 SLC35A3Q9Y2D2 325 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 IGLV3-16A0A075B6K0 115 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 H3BML4 177 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 IGFALSP35858 605 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 RPS5P46782 204 aaKnown RBP12.34□□□□□ -0.43
CASC4-201ENST00000299957 OR1D4P47884 311 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 S100A10P60903 97 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 HHEXQ03014 270 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 CDNFQ49AH0 187 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 MFSD12Q6NUT3 480 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 ARHGAP11AQ6P4F7 1023 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 ZNF836Q6ZNA1 936 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 PRSS41Q7RTY9 318 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 CDRT4Q8N9R6 151 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 DUSP19Q8WTR2 217 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 MOAP1Q96BY2 351 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 TSPAN10Q9H1Z9 355 aaPredicted RBP12.34□□□□□ -0.43
CASC4-201ENST00000299957 CHMP1AQ9HD42 196 aaPredicted RBP12.34□□□□□ -0.43
CASC4-201ENST00000299957 LAMA3Q16787 3333 aa12.34□□□□□ -0.43
CASC4-201ENST00000299957 A0A0A6YYJ9 748 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 IDSB3KWA1 339 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 AGPAT2O15120 278 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 EVX1P49640 407 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 MVDP53602 400 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 REEP5Q00765 189 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 CDKN3Q16667 212 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 ZNF767PQ75MW2 155 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 TEX19Q8NA77 164 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 OR4C15Q8NGM1 316 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 OR5AK2Q8NH90 309 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms