RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 TM4SF1P30408 202 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 MC3RP41968 323 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 ADIRFQ15847 76 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 PHYHD1Q5SRE7 291 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 H3F3CQ6NXT2 135 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 RBMS3Q6XE24 437 aaKnown RBP13.93□□□□□ -0.18
SCN3B-201ENST00000299333 ZC3H3Q8IXZ2 948 aaKnown RBP13.93□□□□□ -0.18
SCN3B-201ENST00000299333 CADM3Q8N126 398 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 OR9A2Q8NGT5 310 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 HAVCR2Q8TDQ0 301 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 C1QTNF2Q9BXJ5 285 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 OSGIN2Q9Y236 505 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 RNASET2O00584 256 aaKnown RBP13.93□□□□□ -0.18
SCN3B-201ENST00000299333 PRDX3P30048 256 aaKnown RBP13.93□□□□□ -0.18
SCN3B-201ENST00000299333 EMP2P54851 167 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 ILKQ13418 452 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 C17orf107Q6ZR85 190 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 NLGN4YQ8NFZ3 816 aaPredicted RBP13.93□□□□□ -0.18
SCN3B-201ENST00000299333 CPNE4Q96A23 557 aaPredicted RBP13.93□□□□□ -0.18
SCN3B-201ENST00000299333 BORCS6Q96GS4 357 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 SLC39A13Q96H72 371 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 PRRC1Q96M27 445 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 HERPUD2Q9BSE4 406 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 KCMF1Q9P0J7 381 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 TMEM235A6NFC5 223 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 SDC1P18827 310 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 CPT2P23786 658 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 FCER1GP30273 86 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 C6orf132Q5T0Z8 1188 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 KIAA0319Q5VV43 1072 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 SBSNQ6UWP8 590 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 ABHD12BQ7Z5M8 362 aaPredicted RBP13.92□□□□□ -0.18
SCN3B-201ENST00000299333 SCARB1Q8WTV0 552 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 OR52D1Q9H346 318 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 INIPQ9NRY2 104 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 COCHO43405 550 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 HIST2H3AQ71DI3 136 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 LRRC15Q8TF66 581 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 C11orf84Q9BUA3 381 aaPredicted RBP13.92□□□□□ -0.18
SCN3B-201ENST00000299333 TMEM72A0PK05 275 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 GJB5O95377 273 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 ACRP10323 421 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 DDOSTP39656 456 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 EEF1A1P68104 462 aaKnown RBP13.92□□□□□ -0.18
SCN3B-201ENST00000299333 GLO1Q04760 184 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 TESK1Q15569 626 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 MSI2Q96DH6 328 aaKnown RBP13.92□□□□□ -0.18
SCN3B-201ENST00000299333 UHRF2Q96PU4 802 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 PDCD1LG2Q9BQ51 273 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 ZNF286AQ9HBT8 521 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 GMEB2Q9UKD1 530 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 SCO1O75880 301 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 PTHP01270 115 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 JMJD7P0C870 316 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 GABRA5P31644 462 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 NPBWR1P48145 328 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 HSF1Q00613 529 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 LMAN2Q12907 356 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 GBX1Q14549 363 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 LEXMQ3ZCV2 418 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 SIAH3Q8IW03 269 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 OR6T1Q8NGN1 323 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 BPIFA2Q96DR5 249 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 C3orf30Q96M34 536 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 NECTIN4Q96NY8 510 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 MS4A4EQ96PG1 132 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 HCAR1Q9BXC0 346 aa13.92□□□□□ -0.18
SCN3B-201ENST00000299333 AFDNP55196 1824 aaKnown RBP13.91□□□□□ -0.18
SCN3B-201ENST00000299333 USP2O75604 605 aaPredicted RBP13.91□□□□□ -0.18
SCN3B-201ENST00000299333 HBE1P02100 147 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 PRAMEF8Q5VWM4 474 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 PRAMEF7Q5VXH5 474 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 ZNF44P15621 663 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 AKR1C1Q04828 323 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 NHSL2Q5HYW2 709 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 SLC6A19Q695T7 634 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 WDR74Q6RFH5 385 aaPredicted RBP13.91□□□□□ -0.18
SCN3B-201ENST00000299333 TMUB2Q71RG4 321 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 NPWQ8N729 165 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 DHRS9Q9BPW9 319 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCN3B-201ENST00000299333 HHLA2Q9UM44 414 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 FAM221BA6H8Z2 402 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 H3BML4 177 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 HLA-DOBP13765 273 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 FOLR1P15328 257 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 TNFRSF17Q02223 184 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 GPR17Q13304 367 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 PGGHGQ32M88 737 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 MANEALQ5VSG8 457 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 TMEM244Q5VVB8 128 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 OGFOD3Q6PK18 319 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 KDELC1Q6UW63 502 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 LGALS14Q8TCE9 139 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 RSPRY1Q96DX4 576 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 RAB3CQ96E17 227 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 OR7D2Q96RA2 312 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 MVB12BQ9H7P6 319 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 NCDNQ9UBB6 729 aa13.91□□□□□ -0.18
SCN3B-201ENST00000299333 ADH1BP00325 375 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms