RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 GPN3Q9UHW5 284 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-202ENST00000297979 GPR52Q9Y2T5 361 aa13.06□□□□□ -0.32
C9orf3-202ENST00000297979 COL27A1Q8IZC6 1860 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-202ENST00000297979 A0A087WUJ7 227 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 A0A1W2PQD3 144 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 CH25HO95992 272 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 HMGN1P05114 100 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 ADORA3P0DMS8 318 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 BMP7P18075 431 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 MLLT10P55197 1068 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 NRG3P56975 720 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 FXYD6P3P58550 94 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 MAJINQ3KP22 176 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 SIGIRRQ6IA17 410 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 CBLN3Q6UW01 205 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 SLC16A12Q6ZSM3 486 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 AMER2Q8N7J2 671 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 YIPF6Q96EC8 236 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 CRELD1Q96HD1 420 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 ULBP3Q9BZM4 244 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 UBQLN3Q9H347 655 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 HHATLQ9HCP6 504 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 SLC39A1Q9NY26 324 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.05□□□□□ -0.32
C9orf3-202ENST00000297979 SIGLEC7Q9Y286 467 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 HEATR5AQ86XA9 2040 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 SNTNA6NMZ2 147 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 GNB5O14775 395 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 HCN1O60741 890 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 ARHGDIBP52566 201 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 CRYZQ08257 329 aaKnown RBP13.05□□□□□ -0.32
C9orf3-202ENST00000297979 NUBPLQ8TB37 319 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 PMEPA1Q969W9 287 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 CCNL2Q96S94 520 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-202ENST00000297979 CMKLR1Q99788 373 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 LAT2Q9GZY6 243 aa13.05□□□□□ -0.32
C9orf3-202ENST00000297979 GPN2Q9H9Y4 310 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-202ENST00000297979 AKAP7Q9P0M2 348 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-202ENST00000297979 B4E171 279 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 ALG1L2C9J202 215 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 PRODHO43272 600 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 PTHP01270 115 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 CCNA2P20248 432 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 SMARCD3Q6STE5 483 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 MR1Q95460 341 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 TMEM80Q96HE8 168 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 DCUN1D5Q9BTE7 237 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 TBL1XR1Q9BZK7 514 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 TAS2R16Q9NYV7 291 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 TRBV11-1A0A0K0K1C0 115 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 KDM4EB2RXH2 506 aaPredicted RBP13.04□□□□□ -0.32
C9orf3-202ENST00000297979 GALR2O43603 387 aaPredicted RBP13.04□□□□□ -0.32
C9orf3-202ENST00000297979 ADRA2AP08913 450 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 GRK5P34947 590 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 SLC6A8P48029 635 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 ZNF117Q03924 483 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 NCF4Q15080 339 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 C8orf44Q96CB5 159 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 RTN4RQ9BZR6 473 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 ICAM5Q9UMF0 924 aa13.04□□□□□ -0.32
C9orf3-202ENST00000297979 TRAV27A0A087WT01 109 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-202ENST00000297979 OR6C70A6NIJ9 312 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 C9J4A7 227 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 BHLHE40O14503 412 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 CDX4O14627 284 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-202ENST00000297979 GABARAPO95166 117 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 PNMTP11086 282 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 CD59P13987 128 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 SLC26A5P58743 744 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 SF3A2Q15428 464 aaKnown RBP13.03□□□□□ -0.32
C9orf3-202ENST00000297979 TIGD6Q17RP2 521 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 TMEM44Q2T9K0 475 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 FAM199XQ6PEV8 388 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-202ENST00000297979 FAM198BQ6UWH4 519 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 ZNF367Q7RTV3 350 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 OAFQ86UD1 273 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 MARCH3Q86UD3 253 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 P2RY8Q86VZ1 359 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 SH3YL1Q96HL8 342 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-202ENST00000297979 BCL7BQ9BQE9 202 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 NPFFR2Q9Y5X5 522 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 A0A1W2PPW3 197 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 ELOA3DA6NLF2 546 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-202ENST00000297979 HCRTR2O43614 444 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 PTP4A3O75365 173 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 ELOA3BQ3SY89 546 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 ATG4DQ86TL0 474 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-202ENST00000297979 NAXDQ8IW45 347 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 LNX2Q8N448 690 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 SCAIQ8N9R8 606 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 ELOA3Q8NG57 546 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 OR8K3Q8NH51 312 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 OR51A7Q8NH64 312 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 SGTBQ96EQ0 304 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 SLC19A3Q9BZV2 496 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 ZBTB20Q9HC78 741 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-202ENST00000297979 C12orf4Q9NQ89 552 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 RALGAPA1Q6GYQ0 2036 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 FRYLO94915 3013 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms