RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 BRIX1Q8TDN6 353 aaKnown RBP14.22□□□□□ -0.13
LSM6-201ENST00000296581 GGHQ92820 318 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 PHOX2BQ99453 314 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 SPRY4Q9C004 299 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 ZNF700Q9H0M5 742 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 TVP23BQ9NYZ1 205 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 ICAM5Q9UMF0 924 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 OTOGLQ3ZCN5 2332 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 ZNF182P17025 639 aaPredicted RBP14.21□□□□□ -0.13
LSM6-201ENST00000296581 SLC6A8P48029 635 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 CTAG1AP78358 180 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 ZNF117Q03924 483 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 NFATC3Q12968 1075 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 OCLNQ16625 522 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 GTF2IRD2BQ6EKJ0 949 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 AHSA2Q719I0 299 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 MARCH3Q86UD3 253 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 GTF2IRD2Q86UP8 949 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 FAM26EQ8N5C1 309 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 TCEANCQ8N8B7 351 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 ELP5Q8TE02 316 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 Q96MT0 163 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 IL4I1Q96RQ9 567 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 TSSK6Q9BXA6 273 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 TBL1XR1Q9BZK7 514 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 CCDC90BQ9GZT6 254 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 NAA50Q9GZZ1 169 aaKnown RBP14.21□□□□□ -0.13
LSM6-201ENST00000296581 HS3ST3B1Q9Y662 390 aa14.21□□□□□ -0.13
LSM6-201ENST00000296581 CCDC187A0A096LP49 1063 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 IGHV1-45A0A0A0MS14 117 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 A0A1W2PQ72 361 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 ADAM10O14672 748 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 PRKYO43930 277 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 MT-ND2P03891 347 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 JMJD7P0C870 316 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 TGM1P22735 817 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 EVI2BP34910 448 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 NUDT6P53370 316 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 EMX1Q04741 257 aaPredicted RBP14.21□□□□□ -0.14
LSM6-201ENST00000296581 EIF3IQ13347 325 aaKnown RBP14.21□□□□□ -0.14
LSM6-201ENST00000296581 C6orf15Q6UXA7 325 aaPredicted RBP14.21□□□□□ -0.14
LSM6-201ENST00000296581 LSRQ86X29 649 aaPredicted RBP14.21□□□□□ -0.14
LSM6-201ENST00000296581 PRSS33Q8NF86 280 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 OR4Q3Q8NH05 313 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 MUL1Q969V5 352 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 IMMP1LQ96LU5 166 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 COPS4Q9BT78 406 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 ZBTB20Q9HC78 741 aaPredicted RBP14.21□□□□□ -0.14
LSM6-201ENST00000296581 PADI1Q9ULC6 663 aa14.21□□□□□ -0.14
LSM6-201ENST00000296581 A0A1W2PNU3 283 aaPredicted RBP14.2□□□□□ -0.14
LSM6-201ENST00000296581 PLD2O14939 933 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 ENTPD6O75354 484 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 COX6A1P12074 109 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 IDUAP35475 653 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 FOLR3P41439 243 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 NR4A2P43354 598 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 FXYD6P3P58550 94 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 GLRX5Q86SX6 157 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 ATG4DQ86TL0 474 aaPredicted RBP14.2□□□□□ -0.14
LSM6-201ENST00000296581 OR13F1Q8NGS4 319 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 RNF138Q8WVD3 245 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 HGDQ93099 445 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 MYDGFQ969H8 173 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 DEPDC7Q96QD5 511 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 PRRG3Q9BZD7 231 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 B3GNT4Q9C0J1 378 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 AMBNQ9NP70 447 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 CNOT2Q9NZN8 540 aaKnown RBP14.2□□□□□ -0.14
LSM6-201ENST00000296581 NCDNQ9UBB6 729 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 MYOTQ9UBF9 498 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 PCNX2A6NKB5 2137 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 C9orf172C9J069 976 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 WWP2O00308 870 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 CLPXO76031 633 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 SEC14L2O76054 403 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 IGHEP01854 428 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 CDK1P06493 297 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 PRKCAP17252 672 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 MST1P26927 711 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 SLC15A1P46059 708 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 MASP1P48740 699 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 CCR4P51679 360 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 NKX2-5P52952 324 aaPredicted RBP14.2□□□□□ -0.14
LSM6-201ENST00000296581 MVKQ03426 396 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 TUBA3CQ13748 450 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 RPL13AP3Q6NVV1 102 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 TIPARPQ7Z3E1 657 aaKnown RBP14.2□□□□□ -0.14
LSM6-201ENST00000296581 BTLAQ7Z6A9 289 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 SVOPQ8N4V2 548 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 THAP3Q8WTV1 239 aaPredicted RBP14.2□□□□□ -0.14
LSM6-201ENST00000296581 FAR1Q8WVX9 515 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 SLC19A3Q9BZV2 496 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 OR52D1Q9H346 318 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 SIGLEC7Q9Y286 467 aa14.2□□□□□ -0.14
LSM6-201ENST00000296581 ZSCAN5BA6NJL1 495 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 EFCAB9A8MZ26 197 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 HCRTR2O43614 444 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 SCO2O43819 266 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 PTP4A3O75365 173 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 RAB40ALP0C0E4 278 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms