RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 CLDN22Q8N7P3 220 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 ZSCAN4Q8NAM6 433 aaPredicted RBP12.52□□□□□ -0.41
HPS3-201ENST00000296051 TOR1AIP2Q8NFQ8 470 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 OR56A3Q8NH54 315 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 INSM2Q96T92 566 aaPredicted RBP12.52□□□□□ -0.41
HPS3-201ENST00000296051 ARRDC1-AS1Q9H2J1 176 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 DHCR7Q9UBM7 475 aaKnown RBP12.52□□□□□ -0.41
HPS3-201ENST00000296051 CDC14CA4D256 554 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 SLC22A5O76082 557 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 OPN1LWP04000 364 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 UCHL1P09936 223 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 ZNF28P17035 718 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 GBX1Q14549 363 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 NKAIN2Q5VXU1 208 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 OR9A4Q8NGU2 314 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 OR2L2Q8NH16 312 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 OR6C1Q96RD1 312 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 MFFQ9GZY8 342 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 OBP2AQ9NY56 170 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 KLHL9Q9P2J3 617 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 NUBP2Q9Y5Y2 271 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 ACOD1A6NK06 481 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 PRRT4C9JH25 899 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 SCGB1D2O95969 90 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 C1SP09871 688 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 GABRA5P31644 462 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 SOX18P35713 384 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 GZMKP49863 264 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 APOOLQ6UXV4 268 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 NPAP1Q9NZP6 1156 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 PADI1Q9ULC6 663 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 CLEC4EQ9ULY5 219 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 LIPT1Q9Y234 373 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 NAALAD2Q9Y3Q0 740 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 ATG2BQ96BY7 2078 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 ZC3H12DA2A288 527 aaKnown RBP12.51□□□□□ -0.41
HPS3-201ENST00000296051 ATP6V1G2-DDX39BF2Z307 99 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 DSCR3O14972 297 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 LRRTM2O43300 516 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 SCGNO76038 276 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 TCRBP04435 133 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 BMP1P13497 986 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 ABOP16442 354 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 PVALBP20472 110 aaPredicted RBP12.51□□□□□ -0.41
HPS3-201ENST00000296051 NOVA1P51513 510 aaKnown RBP12.51□□□□□ -0.41
HPS3-201ENST00000296051 RPE65Q16518 533 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 SYT14P1Q58G82 188 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 LRRC28Q86X40 367 aaPredicted RBP12.51□□□□□ -0.41
HPS3-201ENST00000296051 TEX19Q8NA77 164 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 SLC25A46Q96AG3 418 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 PRRC1Q96M27 445 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 TM7SF3Q9NS93 570 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 ERVK-19Q9WJR5 959 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 EIF3FO00303 357 aaPredicted RBP12.51□□□□□ -0.41
HPS3-201ENST00000296051 AGPAT2O15120 278 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 BRINP1O60477 761 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 ZNF780AO75290 641 aaPredicted RBP12.51□□□□□ -0.41
HPS3-201ENST00000296051 SIX6O95475 246 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 ITGA5P08648 1049 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 AQP2P41181 271 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 QSOX2Q6ZRP7 698 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 LINC00696Q6ZRV3 163 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 SIAH3Q8IW03 269 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 ZNF283Q8N7M2 679 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 FRMD1Q8N878 549 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 SMAP2Q8WU79 429 aaPredicted RBP12.51□□□□□ -0.41
HPS3-201ENST00000296051 THAP4Q8WY91 577 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 CNOT9Q92600 299 aaKnown RBP12.51□□□□□ -0.41
HPS3-201ENST00000296051 OR2A14Q96R47 310 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 KATNB1Q9BVA0 655 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 C1QTNF3Q9BXJ4 246 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 CST11Q9H112 138 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 NT5DC2Q9H857 520 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 MYNNQ9NPC7 610 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 FBXL2Q9UKC9 423 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 POLHQ9Y253 713 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 NHSQ6T4R5 1651 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 A0A1B0GVI7 797 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 RBM34P42696 430 aaKnown RBP12.51□□□□□ -0.41
HPS3-201ENST00000296051 VEGFCP49767 419 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 P2RX3P56373 397 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 UBE2NP61088 152 aaKnown RBP12.51□□□□□ -0.41
HPS3-201ENST00000296051 GALK2Q01415 458 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 MRPL49Q13405 166 aaKnown RBP12.51□□□□□ -0.41
HPS3-201ENST00000296051 GPR176Q14439 515 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 STK11Q15831 433 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 OR5M10Q6IEU7 315 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 SLCO4C1Q6ZQN7 724 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 MOAP1Q96BY2 351 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 CLCC1Q96S66 551 aa12.51□□□□□ -0.41
HPS3-201ENST00000296051 B8ZZF3 427 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 ART1P52961 327 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 EEF1A2Q05639 463 aaKnown RBP12.5□□□□□ -0.41
HPS3-201ENST00000296051 AIMP2Q13155 320 aaKnown RBP12.5□□□□□ -0.41
HPS3-201ENST00000296051 FAM76BQ5HYJ3 339 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 ENTPD8Q5MY95 495 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 ZNF765Q7L2R6 523 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 FCRLAQ7L513 359 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 SGTBQ96EQ0 304 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 DDOQ99489 341 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms