RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 TMEM72A0PK05 275 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 TMEM247A6NEH6 219 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 AGAP5A6NIR3 686 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 C5orf58C9J3I9 102 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 SMAD9O15198 467 aaKnown RBP8.7□□□□□ -1.02
CCDC58-201ENST00000291458 FRS3O43559 492 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 IGHV3-9P01782 118 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 RAF1P04049 648 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 NCF2P19878 526 aaPredicted RBP8.7□□□□□ -1.02
CCDC58-201ENST00000291458 CD33P20138 364 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 EDNRAP25101 427 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 ADH6P28332 368 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 TACR3P29371 465 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 DIO1P49895 249 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 MVDP53602 400 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 CRISP3P54108 245 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 OR2B6P58173 313 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 LRRC74AQ0VAA2 488 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 RASGEF1BQ0VAM2 473 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 DAZAP2Q15038 168 aaPredicted RBP8.7□□□□□ -1.02
CCDC58-201ENST00000291458 LIN52Q52LA3 116 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 TFAP2EQ6VUC0 442 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 LRRC74BQ6ZQY2 392 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 C22orf34Q6ZV56 151 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 GRINAQ7Z429 371 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 PEX5LQ8IYB4 626 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 OR52P1PQ8NH57 321 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 GTF2H4Q92759 462 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 SPDL1Q96EA4 605 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 ARL5BQ96KC2 179 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 ACTR6Q9GZN1 396 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 PAIP1Q9H074 479 aaKnown RBP8.7□□□□□ -1.02
CCDC58-201ENST00000291458 SAP130Q9H0E3 1048 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 ELOVL5Q9NYP7 299 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 ZNF226Q9NYT6 803 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 CHRNA9Q9UGM1 479 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 PRSS50Q9UI38 385 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 LIPT1Q9Y234 373 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 ZNF443Q9Y2A4 671 aaPredicted RBP8.7□□□□□ -1.02
CCDC58-201ENST00000291458 PCDHB14Q9Y5E9 798 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 SPIN1Q9Y657 262 aaPredicted RBP8.7□□□□□ -1.02
CCDC58-201ENST00000291458 SPG11Q96JI7 2443 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 PRR14LQ5THK1 2151 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 ABCA4P78363 2273 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 F8P00451 2351 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 TMED7-TICAM2A0A0A6YYA0 188 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 A0A0G2JND7 137 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 CFAP73A6NFT4 308 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 DEFB108AA8MXU0 73 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 LYZL6O75951 148 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 PRKD3O94806 890 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 DBIP07108 87 aaKnown RBP8.69□□□□□ -1.02
CCDC58-201ENST00000291458 PABPC4LP0CB38 370 aaKnown RBP8.69□□□□□ -1.02
CCDC58-201ENST00000291458 NID1P14543 1247 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 PTNP21246 168 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 RPS4Y1P22090 263 aaKnown RBP8.69□□□□□ -1.02
CCDC58-201ENST00000291458 IL32P24001 234 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 AQP1P29972 269 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 RAC3P60763 192 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 HOXC5Q00444 222 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 BNIP2Q12982 314 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 GNA13Q14344 377 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 CAPRIN1Q14444 709 aaKnown RBP8.69□□□□□ -1.02
CCDC58-201ENST00000291458 SQLEQ14534 574 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 RNPS1Q15287 305 aaKnown RBP8.69□□□□□ -1.02
CCDC58-201ENST00000291458 MAPK11Q15759 364 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 STK11Q15831 433 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 SLC25A53Q5H9E4 307 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 PAGE3Q5JUK9 113 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 GCNT6Q5T4J0 391 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 GTF2IRD2BQ6EKJ0 949 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 STAC2Q6ZMT1 411 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 MSANTD1Q6ZTZ1 278 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 GTF2IRD2Q86UP8 949 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 MSRB3Q8IXL7 192 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 ZNF100Q8IYN0 542 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 NFKBIDQ8NI38 313 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 SLC38A5Q8WUX1 472 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 CKAP2Q8WWK9 683 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 S100PBPQ96BU1 408 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 MAGEB18Q96M61 343 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 PSD2Q9BQI7 771 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 CCDC106Q9BWC9 280 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 GLRX2Q9NS18 164 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 SLC25A37Q9NYZ2 338 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 SLAMF8Q9P0V8 285 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 KLHL9Q9P2J3 617 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 GDF2Q9UK05 429 aaPredicted RBP8.69□□□□□ -1.02
CCDC58-201ENST00000291458 TMED7Q9Y3B3 224 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 MED13LQ71F56 2210 aa8.69□□□□□ -1.02
CCDC58-201ENST00000291458 PRRC2AP48634 2157 aaKnown RBP8.68□□□□□ -1.02
CCDC58-201ENST00000291458 A0A096LPI6 279 aa8.68□□□□□ -1.02
CCDC58-201ENST00000291458 ZC3H12DA2A288 527 aaKnown RBP8.68□□□□□ -1.02
CCDC58-201ENST00000291458 FAM221AA4D161 298 aa8.68□□□□□ -1.02
CCDC58-201ENST00000291458 FAM181BA6NEQ2 426 aa8.68□□□□□ -1.02
CCDC58-201ENST00000291458 ZNF814B7Z6K7 855 aa8.68□□□□□ -1.02
CCDC58-201ENST00000291458 CLIC1O00299 241 aa8.68□□□□□ -1.02
CCDC58-201ENST00000291458 RAMP1O60894 148 aa8.68□□□□□ -1.02
CCDC58-201ENST00000291458 ATE1O95260 518 aa8.68□□□□□ -1.02
CCDC58-201ENST00000291458 ADAP00813 363 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms