RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 CADM3Q8N126 398 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 SLC2A12Q8TD20 617 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 TP53INP1Q96A56 240 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 RTN4RQ9BZR6 473 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 PCED1AQ9H1Q7 454 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 ABCB9Q9NP78 766 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 PLEKHB1Q9UF11 243 aaPredicted RBP17.49■□□□□ 0.39
SHF-201ENST00000290894 PRODH2Q9UF12 536 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 SLC35A3Q9Y2D2 325 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 A0A075B6Q4 140 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 C4orf47A7E2U8 309 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 E9PI62 339 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 HIST1H1CP16403 213 aaKnown RBP17.49■□□□□ 0.39
SHF-201ENST00000290894 ZNF3P17036 446 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 RPL4P36578 427 aaKnown RBP17.49■□□□□ 0.39
SHF-201ENST00000290894 EPHA4P54764 986 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 KLHL26Q53HC5 615 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 RPTNQ6XPR3 784 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 TMPRSS9Q7Z410 1059 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 OR8H2Q8N162 312 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 FAM98AQ8NCA5 519 aaKnown RBP17.49■□□□□ 0.39
SHF-201ENST00000290894 DNASE2BQ8WZ79 361 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 C3orf49Q96BT1 292 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 SMAD5Q99717 465 aaKnown RBP17.49■□□□□ 0.39
SHF-201ENST00000290894 DPYSL5Q9BPU6 564 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 NDC1Q9BTX1 674 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 KLHL1Q9NR64 748 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 MUTYHQ9UIF7 546 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 IER3IP1Q9Y5U9 82 aa17.49■□□□□ 0.39
SHF-201ENST00000290894 CACNA1CQ13936 2221 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 CCDC182A6NF36 153 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 SAGE2PA6NJ88 616 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 GLB1P16278 677 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 ZNF181Q2M3W8 571 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 RPL13AP3Q6NVV1 102 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 POMZP3Q6PJE2 187 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 LINC00114Q6XXX2 140 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 MARCH9Q86YJ5 346 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 ZMYND19Q96E35 227 aaPredicted RBP17.48■□□□□ 0.39
SHF-201ENST00000290894 RAB33BQ9H082 229 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 MKKSQ9NPJ1 570 aaPredicted RBP17.48■□□□□ 0.39
SHF-201ENST00000290894 MKL2Q9ULH7 1088 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 A0A1W2PQL4 384 aaPredicted RBP17.48■□□□□ 0.39
SHF-201ENST00000290894 CASKO14936 926 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 TPD52L2O43399 206 aaKnown RBP17.48■□□□□ 0.39
SHF-201ENST00000290894 SOX30O94993 753 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 PEPDP12955 493 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 PSPHP78330 225 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 ARHGAP40Q5TG30 622 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 TMPRSS11AQ6ZMR5 421 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 CCDC86Q9H6F5 360 aaKnown RBP17.48■□□□□ 0.39
SHF-201ENST00000290894 FGF21Q9NSA1 209 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 CTSFQ9UBX1 484 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 SIT1Q9Y3P8 196 aa17.48■□□□□ 0.39
SHF-201ENST00000290894 TMEM265A0A087WTH1 108 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 A0A087WUJ7 227 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 GABRPO00591 440 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 POLR1CO15160 346 aaPredicted RBP17.47■□□□□ 0.39
SHF-201ENST00000290894 IL1AP01583 271 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 FOSL2P15408 326 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 FBLP22087 321 aaKnown RBP17.47■□□□□ 0.39
SHF-201ENST00000290894 SLC6A6P31641 620 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 RBM34P42696 430 aaKnown RBP17.47■□□□□ 0.39
SHF-201ENST00000290894 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.47■□□□□ 0.39
SHF-201ENST00000290894 LANCL3Q6ZV70 420 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 SSX6Q7RTT6 188 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 C10orf53Q8N6V4 93 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 SGTBQ96EQ0 304 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 ZNF578Q96N58 590 aaPredicted RBP17.47■□□□□ 0.39
SHF-201ENST00000290894 NUDT9Q9BW91 350 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 ADGRL4Q9HBW9 690 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 ZNF304Q9HCX3 659 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 TIGARQ9NQ88 270 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 V9GYH0 126 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 FREM2Q5SZK8 3169 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 IGHV3-20A0A0C4DH32 117 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 GTPBP1O00178 669 aaKnown RBP17.47■□□□□ 0.39
SHF-201ENST00000290894 ICOSLGO75144 302 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 UTS2O95399 124 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 DDAH2O95865 285 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 HK1P19367 917 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 DHPSP49366 369 aaPredicted RBP17.47■□□□□ 0.39
SHF-201ENST00000290894 ARIH2OSQ8N7S6 290 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 OR52N1Q8NH53 320 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 ZPLD1Q8TCW7 415 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 CCDC74AQ96AQ1 378 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 UBQLN4Q9NRR5 601 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 GSTK1Q9Y2Q3 226 aa17.47■□□□□ 0.39
SHF-201ENST00000290894 CPED1A4D0V7 1026 aa17.46■□□□□ 0.39
SHF-201ENST00000290894 SLC22A31A6NKX4 558 aa17.46■□□□□ 0.39
SHF-201ENST00000290894 EFCAB7A8K855 629 aa17.46■□□□□ 0.39
SHF-201ENST00000290894 BLOC1S5-TXNDC5H3BN57 136 aa17.46■□□□□ 0.39
SHF-201ENST00000290894 RORAP35398 523 aa17.46■□□□□ 0.39
SHF-201ENST00000290894 NAA10P41227 235 aaPredicted RBP17.46■□□□□ 0.39
SHF-201ENST00000290894 PSMD4P55036 377 aaKnown RBP17.46■□□□□ 0.39
SHF-201ENST00000290894 OR12D2P58182 307 aa17.46■□□□□ 0.39
SHF-201ENST00000290894 SHBQ15464 509 aa17.46■□□□□ 0.39
SHF-201ENST00000290894 ARL9Q6T311 187 aa17.46■□□□□ 0.39
SHF-201ENST00000290894 LYPD4Q6UWN0 246 aa17.46■□□□□ 0.39
SHF-201ENST00000290894 D2HGDHQ8N465 521 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms