RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ACTG1P63261 375 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 ZP2Q05996 745 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 SERTAD2Q14140 314 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 B3GLCTQ6Y288 498 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 BPHLQ86WA6 291 aaPredicted RBP10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 FAM86B1Q8N7N1 296 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 OR5K2Q8NHB8 316 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 HRASLS5Q96KN8 279 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 TGIF2Q9GZN2 237 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 DNTTIP1Q9H147 329 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 TREX1Q9NSU2 369 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 CSNK1G3Q9Y6M4 447 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 GXYLT2A0PJZ3 443 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 UNC119BA6NIH7 251 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 FADS1O60427 444 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 IFNA10P01566 189 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 IFNA4P05014 189 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 SPNP16150 400 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 HLA-DMAP28067 261 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 RASGEF1BQ0VAM2 473 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 RAB40BQ12829 278 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 HYAL2Q12891 473 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 ZNF585AQ6P3V2 769 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 WDR20Q8TBZ3 569 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 ST7LQ8TDW4 575 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 UNKLQ9H9P5 680 aaKnown RBP10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 TUBG2Q9NRH3 451 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 PTRH2Q9Y3E5 179 aaKnown RBP10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 ZNF860A6NHJ4 632 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 HSPA12AO43301 675 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 SLC34A2O95436 690 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 SCG5P05408 212 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 SDC1P18827 310 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 RAB6AP20340 208 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 RAB5CP51148 216 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 RPS27AP62979 156 aaKnown RBP10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 UBA52P62987 128 aaKnown RBP10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 NKPD1Q17RQ9 610 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 PIP5KL1Q5T9C9 394 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 THRSPQ92748 146 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 CLCC1Q96S66 551 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 LYSMD1Q96S90 227 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 SERINC2Q96SA4 455 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 INSM2Q96T92 566 aaPredicted RBP10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 VNN3Q9NY84 501 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 DKKL1Q9UK85 242 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 NXT1Q9UKK6 140 aaKnown RBP10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 DOCK3Q8IZD9 2030 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 SLC16A8O95907 504 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 RAF1P04049 648 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 OR8U9P0C7N5 309 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 PCGF2P35227 344 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 EMP2P54851 167 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 HSD11B2P80365 405 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 CHAF1BQ13112 559 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 ACSM3Q53FZ2 586 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 AGBL4Q5VU57 503 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 HACD4Q5VWC8 232 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 KIAA1211LQ6NV74 962 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 DPY19L2P1Q6NXN4 242 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 APOOLQ6UXV4 268 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 SLC16A9Q7RTY1 509 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 FAM122BQ7Z309 247 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 ZFP82Q8N141 532 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 BRIX1Q8TDN6 353 aaKnown RBP10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 C2CD4CQ8TF44 421 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 KLF15Q9UIH9 416 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 TLCD2A6NGC4 264 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 TLX3O43711 291 aaPredicted RBP10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 RAB3DO95716 219 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 DRD2P14416 443 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 PSMB1P20618 241 aaKnown RBP10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 MAOAP21397 527 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 AOAHP28039 575 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 GRPRP30550 384 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 S100A11P31949 105 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 CDKN1CP49918 316 aaPredicted RBP10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 IDH3GP51553 393 aaPredicted RBP10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 ASAH1Q13510 395 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 NSDHLQ15738 373 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 HLA-BQ31612 363 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 OTUD1Q5VV17 481 aaPredicted RBP10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 OR4C11Q6IEV9 310 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 NLRP8Q86W28 1048 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 MEX3DQ86XN8 651 aaKnown RBP10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 LSMEM1Q8N8F7 131 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 ZNF565Q8N9K5 539 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 PNLDC1Q8NA58 520 aaKnown RBP10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 OR5W2Q8NH69 310 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 EGLN2Q96KS0 407 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 ATOH8Q96SQ7 321 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 S1PR5Q9H228 398 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 SLC38A1Q9H2H9 487 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 PDFQ9HBH1 243 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 CNIH4Q9P003 139 aa10.61□□□□□ -0.71
NPC1L1-201ENST00000289547 SMCO3A2RU48 225 aa10.6□□□□□ -0.71
NPC1L1-201ENST00000289547 B4DXG7 233 aa10.6□□□□□ -0.71
NPC1L1-201ENST00000289547 M0R3H8 397 aa10.6□□□□□ -0.71
NPC1L1-201ENST00000289547 UGDHO60701 494 aa10.6□□□□□ -0.71
NPC1L1-201ENST00000289547 SCRG1O75711 98 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms