RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 LDOC1O95751 146 aaPredicted RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 TFP02787 698 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 ALDOBP05062 364 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 HOXB3P14651 431 aaPredicted RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 CEBPBP17676 345 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 GPR4P46093 362 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 PDX1P52945 283 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 FXYD6P3P58550 94 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 FLI1Q01543 452 aaPredicted RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 POU4F2Q12837 409 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 ZNF169Q14929 603 aaPredicted RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 ZNF836Q6ZNA1 936 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 HSD17B13Q7Z5P4 300 aaPredicted RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 UBE2Q1Q7Z7E8 422 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 RANBP3LQ86VV4 465 aaPredicted RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 OR2L3Q8NG85 312 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 OR5W2Q8NH69 310 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 TMEM255BQ8WV15 326 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 GAL3ST3Q96A11 431 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 SAMD8Q96LT4 415 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 FERD3LQ96RJ6 166 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 NRTNQ99748 197 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 YIPF4Q9BSR8 244 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 LGR4Q9BXB1 951 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 PBX4Q9BYU1 374 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 LRRN3Q9H3W5 708 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 ISG20L2Q9H9L3 353 aaKnown RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 TM7SF3Q9NS93 570 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 FBXL21Q9UKT6 434 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 KLF2Q9Y5W3 355 aaPredicted RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 MYO10Q9HD67 2058 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 SLC9B1P1A6NJY1 282 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 CDC42EP2O14613 210 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 NUPL2O15504 423 aaKnown RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 PRKRAO75569 313 aaKnown RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 ERAL1O75616 437 aaKnown RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 RCBTB2O95199 551 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 MT-ND4P03905 459 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 SAGP10523 405 aaPredicted RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 CXCL2P19875 107 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 PAICSP22234 425 aaKnown RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 ACTC1P68032 377 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 ACTA1P68133 377 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 DGCR2P98153 550 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 MLLT1Q03111 559 aaPredicted RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 KLF9Q13886 244 aaPredicted RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 GAS6Q14393 721 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 UAP1L1Q3KQV9 507 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 DMKNQ6E0U4 476 aaPredicted RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 BVESQ8NE79 360 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 OR52L1Q8NGH7 329 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 OR9A2Q8NGT5 310 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 SCARB1Q8WTV0 552 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 ZG16BQ96DA0 208 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 HS6ST2Q96MM7 605 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 ZNF350Q9GZX5 532 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 OR52D1Q9H346 318 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 KIR3DX1Q9H7L2 352 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 CTPS2Q9NRF8 586 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 ABRACLQ9P1F3 81 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 LOC400499M0QZD8 3231 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 TRABD2BA6NFA1 517 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 AIPO00170 330 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 PIP5K1CO60331 668 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 RGS11O94810 467 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 LPLP06858 475 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 ANKRD34CP0C6C1 535 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 HOXB1P14653 301 aaPredicted RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 CALCRP30988 508 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 NRG3P56975 720 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 METTL11BQ5VVY1 283 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 B3GNTL1Q67FW5 361 aaPredicted RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 C18orf63Q68DL7 685 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 MEX3DQ86XN8 651 aaKnown RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 SLC44A3Q8N4M1 653 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 FAM71CQ8NEG0 241 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 FANK1Q8TC84 345 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 ADAMTS15Q8TE58 950 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 ZFP3Q96NJ6 502 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 NDC1Q9BTX1 674 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 TMPRSS13Q9BYE2 586 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 NKX2-4Q9H2Z4 354 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 CACYBPQ9HB71 228 aaKnown RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 BEX1Q9HBH7 125 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 SIDT1Q9NXL6 827 aaKnown RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 DEC1Q9P2X7 70 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 SLC7A7Q9UM01 511 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 COPS3Q9UNS2 423 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 PDCD5O14737 125 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 LINC01565O15544 149 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 SLC2A10O95528 541 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 GIPP09681 153 aaPredicted RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 TYRP1P17643 537 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 DRD5P21918 477 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 NFYAP23511 347 aaPredicted RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 CERS1P27544 350 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 OR10A3P58181 314 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 RNASE12Q5GAN4 147 aaKnown RBP9.59□□□□□ -0.87
SKA1-201ENST00000285116 FAM69AQ5T7M9 428 aa9.59□□□□□ -0.87
SKA1-201ENST00000285116 ZCCHC12Q6PEW1 402 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms