RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 CYB561P49447 251 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 EXT1Q16394 746 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 YOD1Q5VVQ6 348 aaPredicted RBP12.72□□□□□ -0.37
NPC1-201ENST00000269228 ZNF704Q6ZNC4 412 aaPredicted RBP12.72□□□□□ -0.37
NPC1-201ENST00000269228 Q8N402 240 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 SIRT6Q8N6T7 355 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 FAM46BQ96A09 425 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 C8orf44Q96CB5 159 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 CCDC120Q96HB5 630 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 MYEF2Q9P2K5 600 aaKnown RBP12.72□□□□□ -0.37
NPC1-201ENST00000269228 H7C1C5 153 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 SBK3P0C264 359 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 IRF2P14316 349 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 PITPNBP48739 271 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 LCN6P62502 163 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 AWAT2Q6E213 333 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 ABHD12BQ7Z5M8 362 aaPredicted RBP12.72□□□□□ -0.37
NPC1-201ENST00000269228 ZBTB8BQ8NAP8 495 aaPredicted RBP12.72□□□□□ -0.37
NPC1-201ENST00000269228 ACOT12Q8WYK0 555 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 TMIGD2Q96BF3 282 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 THOC3Q96J01 351 aaKnown RBP12.72□□□□□ -0.37
NPC1-201ENST00000269228 PARPBPQ9NWS1 579 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 ASCC3Q8N3C0 2202 aaKnown RBP12.72□□□□□ -0.37
NPC1-201ENST00000269228 SYT5O00445 386 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 RRP8O43159 456 aaKnown RBP12.72□□□□□ -0.37
NPC1-201ENST00000269228 ART1P52961 327 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 SMN1Q16637 294 aaKnown RBP12.72□□□□□ -0.37
NPC1-201ENST00000269228 ZNF385BQ569K4 471 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 SLC37A3Q8NCC5 494 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 OR4F15Q8NGB8 312 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 GPR148Q8TDV2 347 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 TSLPQ969D9 159 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 C19orf53Q9UNZ5 99 aaPredicted RBP12.72□□□□□ -0.37
NPC1-201ENST00000269228 LOXL2Q9Y4K0 774 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 RGPD4Q7Z3J3 1758 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 ETHE1O95571 254 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 ALPLP05186 524 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 SLC2A5P22732 501 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 S100A10P60903 97 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 CD83Q01151 205 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 DLEU7Q6UYE1 221 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 SLC2A12Q8TD20 617 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 SLC5A7Q9GZV3 580 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 PPIL1Q9Y3C6 166 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 SLC22A7Q9Y694 548 aa12.72□□□□□ -0.37
NPC1-201ENST00000269228 A0A1B0GTL3 188 aa12.71□□□□□ -0.37
NPC1-201ENST00000269228 PRH1P02810 166 aa12.71□□□□□ -0.37
NPC1-201ENST00000269228 C21orf33P30042 268 aaPredicted RBP12.71□□□□□ -0.37
NPC1-201ENST00000269228 FASLGP48023 281 aa12.71□□□□□ -0.37
NPC1-201ENST00000269228 BMXP51813 675 aa12.71□□□□□ -0.37
NPC1-201ENST00000269228 CLDN17P56750 224 aa12.71□□□□□ -0.37
NPC1-201ENST00000269228 ABHD11Q8NFV4 315 aa12.71□□□□□ -0.37
NPC1-201ENST00000269228 CNOT9Q92600 299 aaKnown RBP12.71□□□□□ -0.37
NPC1-201ENST00000269228 TSPAN11A1L157 253 aa12.71□□□□□ -0.37
NPC1-201ENST00000269228 GCH1P30793 250 aa12.71□□□□□ -0.37
NPC1-201ENST00000269228 TMEM53Q6P2H8 277 aa12.71□□□□□ -0.37
NPC1-201ENST00000269228 MBOAT2Q6ZWT7 520 aa12.71□□□□□ -0.37
NPC1-201ENST00000269228 TMEM255BQ8WV15 326 aa12.71□□□□□ -0.37
NPC1-201ENST00000269228 CCDC74BQ96LY2 380 aa12.71□□□□□ -0.37
NPC1-201ENST00000269228 SIDT1Q9NXL6 827 aaKnown RBP12.71□□□□□ -0.37
NPC1-201ENST00000269228 VSX1Q9NZR4 365 aaPredicted RBP12.71□□□□□ -0.37
NPC1-201ENST00000269228 MTCH2Q9Y6C9 303 aa12.71□□□□□ -0.37
NPC1-201ENST00000269228 PRAMEF25A6NGN4 478 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 PRKYO43930 277 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 PIAS2O75928 621 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 DAPP51397 102 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 RBPJQ06330 500 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 CAMK2DQ13557 499 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 CDNFQ49AH0 187 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 ZNF836Q6ZNA1 936 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 CADM4Q8NFZ8 388 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 C4orf36Q96KX1 117 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 SLC6A7Q99884 636 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 MED20Q9H944 212 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 LRRTM2O43300 516 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 CHRM4P08173 479 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 AMY2BP19961 511 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 DLSTP36957 453 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 ZNF691Q5VV52 312 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 OR7E24Q6IFN5 339 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 AAED1Q7RTV5 226 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 GDF7Q7Z4P5 450 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 LILRA2Q8N149 483 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 CA13Q8N1Q1 262 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 ZNF615Q8N8J6 731 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 CHDHQ8NE62 594 aaPredicted RBP12.71□□□□□ -0.38
NPC1-201ENST00000269228 SP7Q8TDD2 431 aaPredicted RBP12.71□□□□□ -0.38
NPC1-201ENST00000269228 SPNS1Q9H2V7 528 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 SLC6A20Q9NP91 592 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 DUSP22Q9NRW4 184 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 GSKIPQ9P0R6 139 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 POMT2Q9UKY4 750 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 KCNS2Q9ULS6 477 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 AK6Q9Y3D8 172 aaKnown RBP12.71□□□□□ -0.38
NPC1-201ENST00000269228 NPFFR2Q9Y5X5 522 aa12.71□□□□□ -0.38
NPC1-201ENST00000269228 HTR3BO95264 441 aa12.7□□□□□ -0.38
NPC1-201ENST00000269228 BSGP35613 385 aa12.7□□□□□ -0.38
NPC1-201ENST00000269228 RBM34P42696 430 aaKnown RBP12.7□□□□□ -0.38
NPC1-201ENST00000269228 MAGEA2P43356 314 aa12.7□□□□□ -0.38
NPC1-201ENST00000269228 GXYLT1Q4G148 440 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms