RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TMEM185BQ9H7F4 350 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 UCK1Q9HA47 277 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 MBD2Q9UBB5 411 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 PISDQ9UG56 409 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 ASF1AQ9Y294 204 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 C9orf170A2RU37 121 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 ARRDC5A6NEK1 342 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 URADA6NGE7 173 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 K7ERQ8 282 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 MAGEB4O15481 346 aaPredicted RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 CREBL2O60519 120 aaPredicted RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 RAD1O60671 282 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 EFCAB14O75071 495 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 NME6O75414 186 aaPredicted RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 ANXA2P07355 339 aaKnown RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 ACP5P13686 325 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 ST6GAL1P15907 406 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 DDX6P26196 483 aaKnown RBP eCLIP8.12□□□□□ -1.119e-6■■■■□ 22.9
VAPB-201ENST00000265619 ACVR1BP36896 505 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 RNF165Q6ZSG1 346 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 CEACAM19Q7Z692 300 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 NKAIN4Q8IVV8 208 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 CMTM4Q8IZR5 234 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 MUC20Q8N307 709 aaPredicted RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 FAM98AQ8NCA5 519 aaKnown RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 KREMEN2Q8NCW0 462 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 RAB8BQ92930 207 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 RELTQ969Z4 430 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 ISOC2Q96AB3 205 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 C14orf79Q96F83 325 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 DERL3Q96Q80 235 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 SOX7Q9BT81 388 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 MED20Q9H944 212 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 CAPN10Q9HC96 672 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 ZNF629Q9UEG4 869 aaPredicted RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 DMRT1Q9Y5R6 373 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 SAP18O00422 153 aaKnown RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 SLC31A2O15432 143 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 HYAL3O43820 417 aaPredicted RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 FGF19O95750 216 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 CXCL10P02778 98 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 EIF2S3P41091 472 aaKnown RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 ATXN7L3Q14CW9 347 aaPredicted RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 TSC22D1Q15714 1073 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 TMEM44Q2T9K0 475 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 SLC22A10Q63ZE4 541 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 FRG2Q64ET8 278 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 MSANTD1Q6ZTZ1 278 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 TMEM99Q8N816 258 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 LMNTD1Q8N9Z9 388 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 SMIM4Q8WVI0 70 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 MISP3Q96FF7 219 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 TGM7Q96PF1 710 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 FRG2BQ96QU4 278 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 RDH14Q9HBH5 336 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 MAN2C1Q9NTJ4 1040 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 MRPS18AQ9NVS2 196 aaKnown RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 CNIH4Q9P003 139 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 EXOSC1Q9Y3B2 195 aaKnown RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 ARGFXA6NJG6 315 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 NRG2O14511 850 aaPredicted RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 STC2O76061 302 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 CA3P07451 260 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 CPN1P15169 458 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 DGKGP49619 791 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 F2RL1P55085 397 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 CDH11P55287 796 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 RAB5BP61020 215 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 HGFACQ04756 655 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 SERINC3Q13530 473 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 MRPL58Q14197 206 aaKnown RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 PON3Q15166 354 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 ANKRD39Q53RE8 183 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 C10orf91Q5T1B1 145 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 ARMC12Q5T9G4 340 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 JMJD6Q6NYC1 403 aaPredicted RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 TNFAIP8L2Q6P589 184 aaPredicted RBP8.12□□□□□ -1.11
VAPB-201ENST00000265619 DPPA4Q7L190 304 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 SPAG16Q8N0X2 631 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 NUBPLQ8TB37 319 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 HIST1H2BAQ96A08 127 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 VWCEQ96DN2 955 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 FCRL4Q96PJ5 515 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 IFT27Q9BW83 186 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 DZANK1Q9NVP4 752 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 ARL15Q9NXU5 204 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 TAS2R5Q9NYW4 299 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 A4GNTQ9UNA3 340 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 GTF2A1LQ9UNN4 478 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 CCL26Q9Y258 94 aa8.12□□□□□ -1.11
VAPB-201ENST00000265619 PLXNB3Q9ULL4 1909 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 CPED1A4D0V7 1026 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 ZNF705EA8MWA4 302 aaPredicted RBP8.11□□□□□ -1.11
VAPB-201ENST00000265619 YIF1AO95070 293 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 IGHV2-5P01817 119 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 BCHEP06276 602 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 H1F0P07305 194 aaKnown RBP8.11□□□□□ -1.11
VAPB-201ENST00000265619 EPCAMP16422 314 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 LPOP22079 712 aaPredicted RBP8.11□□□□□ -1.11
VAPB-201ENST00000265619 AOAHP28039 575 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms