RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 HK1P19367 917 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 MAKP20794 623 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 CXCR1P25024 350 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 POLR2IP36954 125 aaKnown RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 GPR4P46093 362 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 SUMO3P55854 103 aaPredicted RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 PPP2R2BQ00005 443 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 DAG1Q14118 895 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 C1QL3Q5VWW1 255 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 PGBD2Q6P3X8 592 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 ATG16L2Q8NAA4 619 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 DNAJA4Q8WW22 397 aaPredicted RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 TMEM239Q8WW34 195 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 ACOT11Q8WXI4 607 aaPredicted RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 SDCCAG3Q96C92 435 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 NRBF2Q96F24 287 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 SCMH1Q96GD3 660 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 ABHD17AQ96GS6 310 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 OR11A1Q9GZK7 315 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 RASSF4Q9H2L5 321 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 TMEM185BQ9H7F4 350 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 PTGES2Q9H7Z7 377 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 ZFP64Q9NPA5 681 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 RYDENQ9NUL5 291 aaKnown RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 SELENONQ9NZV5 590 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 DKKL1Q9UK85 242 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 KLF13Q9Y2Y9 288 aaPredicted RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 TMED7Q9Y3B3 224 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 ZZEF1O43149 2961 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 ACACBO00763 2458 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 MKRN2OSH3BPM6 223 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 SUSD5O60279 629 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 TRAPPC6AO75865 159 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 WISP2O76076 250 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 SNAP29O95721 258 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 FAM87AP0C7U9 286 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 THRBP10828 461 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 PEPDP12955 493 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 IFI30P13284 250 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 CBLP22681 906 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 GDF1P27539 372 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 MAGEA5P43359 124 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 OMPP47874 163 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 ALDH3A2P51648 485 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 POLR2HP52434 150 aaKnown RBP8.81□□□□□ -1
SNRNP40-201ENST00000263694 UCNP55089 124 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 DSCR4P56555 118 aaPredicted RBP8.81□□□□□ -1
SNRNP40-201ENST00000263694 PLGLB1Q02325 96 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 EGR4Q05215 589 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 LINC00303Q3SY05 128 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 RNFT1Q5M7Z0 435 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 WIPI1Q5MNZ9 446 aaPredicted RBP8.81□□□□□ -1
SNRNP40-201ENST00000263694 KDM4DQ6B0I6 523 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 FAHD1Q6P587 224 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 TTC33Q6PID6 262 aaPredicted RBP8.81□□□□□ -1
SNRNP40-201ENST00000263694 MBOAT2Q6ZWT7 520 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 RRM2BQ7LG56 351 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 GRINAQ7Z429 371 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 ZADH2Q8N4Q0 377 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 LRRC17Q8N6Y2 441 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 TMEM234Q8WY98 164 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 ST8SIA1Q92185 356 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 KTI12Q96EK9 354 aaPredicted RBP8.81□□□□□ -1
SNRNP40-201ENST00000263694 RBM4BQ9BQ04 359 aaKnown RBP8.81□□□□□ -1
SNRNP40-201ENST00000263694 ZNF426Q9BUY5 554 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 RBM4Q9BWF3 364 aaKnown RBP8.81□□□□□ -1
SNRNP40-201ENST00000263694 TTTY12Q9BZ98 90 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 GABARAPL1Q9H0R8 117 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 ANKRD19PQ9H560 264 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 ZNF71Q9NQZ8 489 aaPredicted RBP8.81□□□□□ -1
SNRNP40-201ENST00000263694 LUZP4Q9P127 313 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 KIF17Q9P2E2 1029 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 TP53TG5Q9Y2B4 290 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 C15orf41Q9Y2V0 281 aa8.81□□□□□ -1
SNRNP40-201ENST00000263694 PCDHGA9Q9Y5G4 932 aaKnown RBP8.81□□□□□ -1
SNRNP40-201ENST00000263694 MAP1BP46821 2468 aaKnown RBP8.8□□□□□ -1
SNRNP40-201ENST00000263694 PRRC2CQ9Y520 2896 aaKnown RBP8.8□□□□□ -1
SNRNP40-201ENST00000263694 KLRC4-KLRK1H3BQV0 150 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 CDC42EP2O14613 210 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 CH25HO95992 272 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 PNMTP11086 282 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 IGFBP5P24593 272 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 EPHA2P29317 976 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 SHC1P29353 583 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 ALDH6A1Q02252 535 aaKnown RBP8.8□□□□□ -1
SNRNP40-201ENST00000263694 PRKCDQ05655 676 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 CRYZQ08257 329 aaKnown RBP8.8□□□□□ -1
SNRNP40-201ENST00000263694 C19orf57Q0VDD7 668 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 SLC25A53Q5H9E4 307 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 C1orf94Q6P1W5 598 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 C19orf48Q6RUI8 117 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 KLHL17Q6TDP4 642 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 IGFL3Q6UXB1 125 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 Q6ZPB1 254 aaPredicted RBP8.8□□□□□ -1
SNRNP40-201ENST00000263694 TMEM251Q8N6I4 163 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 RBMXL3Q8N7X1 1067 aaKnown RBP8.8□□□□□ -1
SNRNP40-201ENST00000263694 FAM83FQ8NEG4 500 aaPredicted RBP8.8□□□□□ -1
SNRNP40-201ENST00000263694 OR14L1PQ8NHC6 308 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 PIGXQ8TBF5 258 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 MPP4Q96JB8 637 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms