RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ELOA3DA6NLF2 546 aaPredicted RBP25.29■■□□□ 1.64
CCM2-201ENST00000258781 MEN1O00255 615 aa25.29■■□□□ 1.64
CCM2-201ENST00000258781 E2F1Q01094 437 aa25.29■■□□□ 1.64
CCM2-201ENST00000258781 FOXK2Q01167 660 aa25.29■■□□□ 1.64
CCM2-201ENST00000258781 DCTN2Q13561 401 aaKnown RBP25.29■■□□□ 1.64
CCM2-201ENST00000258781 TRIP6Q15654 476 aaKnown RBP25.29■■□□□ 1.64
CCM2-201ENST00000258781 ELOA3BQ3SY89 546 aa25.29■■□□□ 1.64
CCM2-201ENST00000258781 APCDD1LQ8NCL9 501 aa25.29■■□□□ 1.64
CCM2-201ENST00000258781 ELOA3Q8NG57 546 aa25.29■■□□□ 1.64
CCM2-201ENST00000258781 ZHX1-C8orf76Q96EF9 292 aa25.29■■□□□ 1.64
CCM2-201ENST00000258781 SPSB2Q99619 263 aa25.29■■□□□ 1.64
CCM2-201ENST00000258781 TMEM43Q9BTV4 400 aa25.29■■□□□ 1.64
CCM2-201ENST00000258781 C12orf10Q9HB07 376 aa25.29■■□□□ 1.64
CCM2-201ENST00000258781 EXOGQ9Y2C4 368 aaKnown RBP25.29■■□□□ 1.64
CCM2-201ENST00000258781 EXPH5Q8NEV8 1989 aa25.29■■□□□ 1.64
CCM2-201ENST00000258781 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.28■■□□□ 1.64
CCM2-201ENST00000258781 TMEM129A0AVI4 362 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 GNB5O14775 395 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 EIF4E2O60573 245 aaKnown RBP25.28■■□□□ 1.64
CCM2-201ENST00000258781 ETV5P41161 510 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 ETV1P50549 477 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 MC2RQ01718 297 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 MLLT11Q13015 90 aaPredicted RBP25.28■■□□□ 1.64
CCM2-201ENST00000258781 DOC2BQ14184 412 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 MOGQ16653 247 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 DGUOKQ16854 277 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 CDCP2Q5VXM1 449 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 FAM186AA6NE01 2351 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 ZNF28P17035 718 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 LIMK1P53667 647 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 NRG3P56975 720 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 TUBA1BP68363 451 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 DESI1Q6ICB0 168 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 DHRS13Q6UX07 377 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 LINC00299Q6ZSB3 139 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 TUBA1AQ71U36 451 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 ATCAYQ86WG3 371 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 DEFB124Q8NES8 71 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 BBS1Q8NFJ9 593 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 NUBPLQ8TB37 319 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 VMP1Q96GC9 406 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 CMKLR1Q99788 373 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 PCDHGA1Q9Y5H4 931 aa25.28■■□□□ 1.64
CCM2-201ENST00000258781 KNTC1P50748 2209 aa25.27■■□□□ 1.64
CCM2-201ENST00000258781 PMS2P1A4D2B8 440 aa25.27■■□□□ 1.64
CCM2-201ENST00000258781 OR6C70A6NIJ9 312 aa25.27■■□□□ 1.64
CCM2-201ENST00000258781 ZNF117Q03924 483 aa25.27■■□□□ 1.64
CCM2-201ENST00000258781 SSX1Q16384 188 aa25.27■■□□□ 1.64
CCM2-201ENST00000258781 ISXQ2M1V0 245 aa25.27■■□□□ 1.64
CCM2-201ENST00000258781 MRPL14Q6P1L8 145 aaKnown RBP25.27■■□□□ 1.64
CCM2-201ENST00000258781 NIPAL3Q6P499 406 aa25.27■■□□□ 1.64
CCM2-201ENST00000258781 PAPD4Q6PIY7 484 aaKnown RBP25.27■■□□□ 1.64
CCM2-201ENST00000258781 PAQR6Q6TCH4 344 aa25.27■■□□□ 1.64
CCM2-201ENST00000258781 TMEM205Q6UW68 189 aa25.27■■□□□ 1.64
CCM2-201ENST00000258781 CRB3Q9BUF7 120 aa25.27■■□□□ 1.64
CCM2-201ENST00000258781 TBL1XR1Q9BZK7 514 aa25.27■■□□□ 1.64
CCM2-201ENST00000258781 WDR54Q9H977 334 aa25.27■■□□□ 1.64
CCM2-201ENST00000258781 FBXO8Q9NRD0 319 aa25.27■■□□□ 1.64
CCM2-201ENST00000258781 IGKV1D-42A0A075B6H8 117 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 RIIAD1A6NNX1 92 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 NDUFB5O43674 189 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 OR7A10O76100 309 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 NDUFB2O95178 105 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 INHBBP09529 407 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 PEPDP12955 493 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 SLC1A3P43003 542 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 SERPINB10P48595 397 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 TMED1Q13445 227 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 SLC35F1Q5T1Q4 408 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 ARMC4Q5T2S8 1044 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 PLBD1Q6P4A8 553 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 ARHGAP11AQ6P4F7 1023 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 USP43Q70EL4 1123 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 CPEB2Q7Z5Q1 589 aaKnown RBP25.26■■□□□ 1.63
CCM2-201ENST00000258781 WDR77Q9BQA1 342 aaPredicted RBP25.26■■□□□ 1.63
CCM2-201ENST00000258781 JAM3Q9BX67 310 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 OR51E2Q9H255 320 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 C19orf25Q9UFG5 118 aaPredicted RBP25.26■■□□□ 1.63
CCM2-201ENST00000258781 ZNF337Q9Y3M9 751 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 SOCS6O14544 535 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 FADS1O60427 444 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 PPP1R3DO95685 299 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 WNT4P56705 351 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 LCN10Q6JVE6 187 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 ASCL5Q7RTU5 278 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 GLRX5Q86SX6 157 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 MARCH3Q86UD3 253 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 KBTBD8Q8NFY9 601 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 LPAR4Q99677 370 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 RTN4RQ9BZR6 473 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 DCSTAMPQ9H295 470 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 PLGRKTQ9HBL7 147 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 OSGIN1Q9UJX0 560 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 NXT1Q9UKK6 140 aaKnown RBP25.26■■□□□ 1.63
CCM2-201ENST00000258781 LOXL2Q9Y4K0 774 aa25.26■■□□□ 1.63
CCM2-201ENST00000258781 CNOT1A5YKK6 2376 aaKnown RBP25.25■■□□□ 1.63
CCM2-201ENST00000258781 PROB1E7EW31 1015 aa25.25■■□□□ 1.63
CCM2-201ENST00000258781 HCRTR2O43614 444 aa25.25■■□□□ 1.63
CCM2-201ENST00000258781 FOXD2O60548 495 aaPredicted RBP25.25■■□□□ 1.63
CCM2-201ENST00000258781 HK1P19367 917 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms