RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 PHC2Q8IXK0 858 aa13.49□□□□□ -0.25
TRAFD1-201ENST00000257604 PIGKQ92643 395 aa13.49□□□□□ -0.25
TRAFD1-201ENST00000257604 TCTN2Q96GX1 697 aa13.49□□□□□ -0.25
TRAFD1-201ENST00000257604 CCDC120Q96HB5 630 aa13.49□□□□□ -0.25
TRAFD1-201ENST00000257604 SENP5Q96HI0 755 aaPredicted RBP13.49□□□□□ -0.25
TRAFD1-201ENST00000257604 CDX2Q99626 313 aaPredicted RBP13.49□□□□□ -0.25
TRAFD1-201ENST00000257604 WACQ9BTA9 647 aa13.49□□□□□ -0.25
TRAFD1-201ENST00000257604 MND1Q9BWT6 205 aa13.49□□□□□ -0.25
TRAFD1-201ENST00000257604 CCDC86Q9H6F5 360 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-201ENST00000257604 GALNT9Q9HCQ5 603 aa13.49□□□□□ -0.25
TRAFD1-201ENST00000257604 TXNL4BQ9NX01 149 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-201ENST00000257604 MED31Q9Y3C7 131 aa13.49□□□□□ -0.25
TRAFD1-201ENST00000257604 THADAQ6YHU6 1953 aa13.49□□□□□ -0.25
TRAFD1-201ENST00000257604 UNC119BA6NIH7 251 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 AGR2O95994 175 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 SYPP08247 313 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 BMP8BP34820 402 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 NAA10P41227 235 aaPredicted RBP13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 RPS25P62851 125 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 EEF1A1P68104 462 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 SMAD2Q15796 467 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 EIPR1Q53HC9 387 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 MTFR2Q6P444 385 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 MBOAT2Q6ZWT7 520 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 BMP8AQ7Z5Y6 402 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 SLC35F3Q8IY50 421 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 SDR9C7Q8NEX9 313 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 TMEM163Q8TC26 289 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 STUB1Q9UNE7 303 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 ADAM18Q9Y3Q7 739 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 ZNF670-ZNF695F2Z2N8 137 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 MSL3P1P0C860 447 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 PEPDP12955 493 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 IL18Q14116 193 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 ARHGAP40Q5TG30 622 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 ZNF57Q68EA5 555 aaPredicted RBP13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 HEPHL1Q6MZM0 1159 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 NPSR1Q6W5P4 371 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 CXXC5Q7LFL8 322 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 SETD6Q8TBK2 473 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 ZNF764Q96H86 408 aaPredicted RBP13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 DCLRE1CQ96SD1 692 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 POLDIP3Q9BY77 421 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 CUTCQ9NTM9 273 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 PLCL2Q9UPR0 1127 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 CNOT1A5YKK6 2376 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 SYT5O00445 386 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 HRO43593 1189 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 GDF9O60383 454 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 P2RX3P56373 397 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 FZD5Q13467 585 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 NCF4Q15080 339 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 QPRTQ15274 297 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 PLET1Q6UQ28 207 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 MED25Q71SY5 747 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 TM9SF4Q92544 642 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 OSTF1Q92882 214 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 FOXN4Q96NZ1 517 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 NELL2Q99435 816 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 ISG20L2Q9H9L3 353 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 SLC25A19Q9HC21 320 aa13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 ZNF346Q9UL40 294 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-201ENST00000257604 C4orf47A7E2U8 309 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 BRINP1O60477 761 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 HPGDSO60760 199 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 CRYZL1O95825 349 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 LALBAP00709 142 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 CDK5Q00535 292 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 CEBPEQ15744 281 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 PGGHGQ32M88 737 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 C14orf28Q4W4Y0 310 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 FHL5Q5TD97 284 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 CBLN3Q6UW01 205 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 OR6K6Q8NGW6 343 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 ZNF563Q8TA94 476 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 FAM174AQ8TBP5 190 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 DEDD2Q8WXF8 326 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 ZDHHC12Q96GR4 267 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 ERMAPQ96PL5 475 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 KLHDC3Q9BQ90 382 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 FUZQ9BT04 418 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 DUSP22Q9NRW4 184 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 MCUBQ9NWR8 336 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 CNOT2Q9NZN8 540 aaKnown RBP13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 SEC14L4Q9UDX3 406 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 LSM2Q9Y333 95 aaKnown RBP13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 SIT1Q9Y3P8 196 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 INPP1P49441 399 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 SNRPGP62308 76 aaKnown RBP13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 GLYR1Q49A26 553 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 LYPD4Q6UWN0 246 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 RPTNQ6XPR3 784 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 ZNF620Q6ZNG0 422 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 SLC25A45Q8N413 288 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 OR6C4Q8NGE1 309 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 ZMYND19Q96E35 227 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 OMA1Q96E52 524 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 MAP6Q96JE9 813 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 MEPEQ9NQ76 525 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms