RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ALG12Q9BV10 488 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 SPATA2Q9UM82 520 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 LOC285556D6RIA3 1793 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 LRP5LA4QPB2 252 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 ADAM23O75077 832 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 PRSS56P0CW18 603 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 CNR1P21554 472 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 CPT2P23786 658 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 LRFN4Q6PJG9 635 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 NLRC3Q7RTR2 1065 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 GALNTL5Q7Z4T8 443 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 FAM181AQ8N9Y4 354 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 RCBTB1Q8NDN9 531 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 CLDN23Q96B33 292 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 LIN37Q96GY3 246 aaPredicted RBP12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 BIRC8Q96P09 236 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 C1QTNF3Q9BXJ4 246 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 TMEM38AQ9H6F2 299 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 ZNF442Q9H7R0 627 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 MOB1AQ9H8S9 216 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 CNOT11Q9UKZ1 510 aaKnown RBP12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 AMDHD2Q9Y303 409 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 RGS9O75916 674 aaPredicted RBP12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 MMP11P24347 488 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 OPRM1P35372 400 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 GABARAPL2P60520 117 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 EIF5AL1Q6IS14 154 aaKnown RBP12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 UGT2A3Q6UWM9 527 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 SLC35F3Q8IY50 421 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 FITM2Q8N6M3 262 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 TRMT10AQ8TBZ6 339 aaKnown RBP12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 SLC5A7Q9GZV3 580 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 SNRPD2P62316 118 aaKnown RBP12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 CCDC92Q53HC0 331 aaPredicted RBP12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 C6orf141Q5SZD1 244 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 SBSNQ6UWP8 590 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 C1orf174Q8IYL3 243 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 TCEANCQ8N8B7 351 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 OR2Y1Q8NGV0 311 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 DNASE2BQ8WZ79 361 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 RDH8Q9NYR8 311 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 ACSL6Q9UKU0 697 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 CBLP22681 906 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 PTGS2P35354 604 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 SLC6A12P48065 614 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 FOXK2Q01167 660 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 BEND4Q6ZU67 534 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 OR2V1Q8NHB1 315 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 CXCL16Q9H2A7 254 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 QPCTLQ9NXS2 382 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 PSMD9O00233 223 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 TACR3P29371 465 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 MAP2K3P46734 347 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 HTR5AP47898 357 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 XKRXQ6PP77 449 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 DPY19L2P2Q6ZN68 376 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 SLC46A3Q7Z3Q1 461 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 D2HGDHQ8N465 521 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 GJC3Q8NFK1 279 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 OR5AK2Q8NH90 309 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 SLC7A13Q8TCU3 470 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 ZNF675Q8TD23 568 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 COX14Q96I36 57 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 WACQ9BTA9 647 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 PILRBQ9UKJ0 227 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 ATP23Q9Y6H3 246 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 ANKUB1A6NFN9 424 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 MPPED1O15442 326 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 UBL3O95164 117 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 CDKN2CP42773 168 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 FAM209AQ5JX71 171 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 ZNF740Q8NDX6 193 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 ZCCHC14Q8WYQ9 949 aaKnown RBP12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 DGCR14Q96DF8 476 aaKnown RBP12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 DCUN1D5Q9BTE7 237 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 SARGQ9BW04 601 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 C12orf65Q9H3J6 166 aaKnown RBP12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 CALHM2Q9HA72 323 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 NADKO95544 446 aaPredicted RBP12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 COL9A1P20849 921 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 SIRPAP78324 504 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 POU3F1Q03052 451 aaPredicted RBP12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 PLGLAQ15195 96 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 CLECL1Q8IZS7 167 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 FRMD1Q8N878 549 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 BOLLQ8N9W6 283 aaKnown RBP12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 GPR148Q8TDV2 347 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 NECAB3Q96P71 396 aaPredicted RBP12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 TECTBQ96PL2 329 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 TBX5Q99593 518 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 CCDC106Q9BWC9 280 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 JAM3Q9BX67 310 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 C5AR2Q9P296 337 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 MALT1Q9UDY8 824 aa12.43□□□□□ -0.42
PRPF38A-201ENST00000257181 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.42□□□□□ -0.42
PRPF38A-201ENST00000257181 OR2A25A4D2G3 310 aa12.42□□□□□ -0.42
PRPF38A-201ENST00000257181 TBX19O60806 448 aa12.42□□□□□ -0.42
PRPF38A-201ENST00000257181 SRP9P49458 86 aaKnown RBP12.42□□□□□ -0.42
PRPF38A-201ENST00000257181 HLCSP50747 726 aa12.42□□□□□ -0.42
PRPF38A-201ENST00000257181 ISXQ2M1V0 245 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms