RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 PIGQQ9BRB3 760 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 A4GALTQ9NPC4 353 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 CD93Q9NPY3 652 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 NXT1Q9UKK6 140 aaKnown RBP8.12□□□□□ -1.11
PTCD3-201ENST00000254630 EMC9Q9Y3B6 208 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 USP54Q70EL1 1684 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 A0A087WUU8 490 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 NAP1L6A6NFF2 107 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 CD300LBA8K4G0 201 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 FOXD2O60548 495 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-201ENST00000254630 ENPP1P22413 925 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 KIAA1024LP59773 190 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 S100A12P80511 92 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 MBTPS1Q14703 1052 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 LTB4RQ15722 352 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 FBXO27Q8NI29 283 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 MUCL1Q96DR8 90 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 SLC41A2Q96JW4 573 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 WDR83Q9BRX9 315 aaKnown RBP8.12□□□□□ -1.11
PTCD3-201ENST00000254630 CXCL16Q9H2A7 254 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 TRBV4-1A0A0J9YWV2 114 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 RRP8O43159 456 aaKnown RBP8.12□□□□□ -1.11
PTCD3-201ENST00000254630 LYRM1O43325 122 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 ABLIM3O94929 683 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 PKLRP30613 574 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 CCL11P51671 97 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 CMPK2Q5EBM0 449 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 TRNP1Q6NT89 227 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 DPY19L2P1Q6NXN4 242 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 VHLLQ6RSH7 139 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 PARM1Q6UWI2 310 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 SLC16A14Q7RTX9 510 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 BPHLQ86WA6 291 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-201ENST00000254630 SLC35F3Q8IY50 421 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 OR1J2Q8NGS2 313 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 MSI2Q96DH6 328 aaKnown RBP8.12□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF597Q96LX8 424 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF587Q96SQ5 575 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-201ENST00000254630 NGBQ9NPG2 151 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 DECR2Q9NUI1 292 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 WDR37Q9Y2I8 494 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 RAB3DO95716 219 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 BMP4P12644 408 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF14P17017 642 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-201ENST00000254630 IMPA1P29218 277 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 ETV4P43268 484 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 RGS6P49758 472 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 RAB31Q13636 194 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF684Q5T5D7 378 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 FAM198BQ6UWH4 519 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 S100PBPQ96BU1 408 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 METTL9Q9H1A3 318 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 ELOVL3Q9HB03 270 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 PRDM9Q9NQV7 894 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 TEX10Q9NXF1 929 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-201ENST00000254630 SERINC4A6NH21 518 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF736B4DX44 427 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-201ENST00000254630 UPK1BO75841 260 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 NCR1O76036 304 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 DCNP07585 359 aaKnown RBP8.12□□□□□ -1.11
PTCD3-201ENST00000254630 MAOAP21397 527 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 MMP12P39900 470 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 HBA1P69905 142 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 CHRNEQ04844 493 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF169Q14929 603 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-201ENST00000254630 HYAL4Q2M3T9 481 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 PRAMEF20Q5VT98 475 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 METTL11BQ5VVY1 283 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF322Q6U7Q0 402 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF836Q6ZNA1 936 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 RFLNAQ6ZTI6 216 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF534Q76KX8 674 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 TDHQ8IZJ6 230 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 SPIN2AQ99865 258 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 SPIN2BQ9BPZ2 258 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 SPHK1Q9NYA1 384 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 V9GY05 133 aa8.12□□□□□ -1.11
PTCD3-201ENST00000254630 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 PRAMEF27A3QJZ7 478 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 CYB5BO43169 146 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 TNFSF12O43508 249 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 PRKRAO75569 313 aaKnown RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 DDAH2O95865 285 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 ALDOCP09972 364 aaKnown RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 BCL6P41182 706 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 DUSP6Q16828 381 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 PRAMEF9Q5VWM5 478 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 ADGRG5Q8IZF4 528 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 SLC15A4Q8N697 577 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 ZFAND1Q8TCF1 268 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 CNOT9Q92600 299 aaKnown RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 CALHM2Q9HA72 323 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 OR14J1Q9UGF5 321 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 RREB1Q92766 1687 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 BCAS1O75363 584 aaPredicted RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 OR8U9P0C7N5 309 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 EDN3P14138 238 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 MSR1P21757 451 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 OPRD1P41143 372 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 PPP5CP53041 499 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms