RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 DVL3Q92997 716 aaPredicted RBP11.08□□□□□ -0.64
USHBP1-201ENST00000252597 YIPF5Q969M3 257 aa11.08□□□□□ -0.64
USHBP1-201ENST00000252597 IL20Q9NYY1 176 aa11.08□□□□□ -0.64
USHBP1-201ENST00000252597 ING1Q9UK53 422 aaPredicted RBP11.08□□□□□ -0.64
USHBP1-201ENST00000252597 ACAD8Q9UKU7 415 aa11.08□□□□□ -0.64
USHBP1-201ENST00000252597 INSL6Q9Y581 213 aa11.08□□□□□ -0.64
USHBP1-201ENST00000252597 NUBP2Q9Y5Y2 271 aa11.08□□□□□ -0.64
USHBP1-201ENST00000252597 ADH1CP00326 375 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 ERVK-25P63136 954 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 SHC2P98077 582 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 LGALS3BPQ08380 585 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 MLF2Q15773 248 aaPredicted RBP11.07□□□□□ -0.64
USHBP1-201ENST00000252597 AANATQ16613 207 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 C4orf46Q504U0 113 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 CNKSR3Q6P9H4 555 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 TMPRSS12Q86WS5 348 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 GID4Q8IVV7 300 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 CMTM4Q8IZR5 234 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 LRRC25Q8N386 305 aaPredicted RBP11.07□□□□□ -0.64
USHBP1-201ENST00000252597 FAM181AQ8N9Y4 354 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 OR2L5Q8NG80 312 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 OR52N1Q8NH53 320 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 ZDHHC1Q8WTX9 485 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 IGFLR1Q9H665 355 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 NT5DC2Q9H857 520 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 FBXL3Q9UKT7 428 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 LIPT1Q9Y234 373 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 A0A0A6YYD5 115 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 A0A1B0GVI7 797 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 TRAPPC13A5PLN9 417 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 SPINT1O43278 529 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 RCBTB2O95199 551 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 PAPLNO95428 1278 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 ACTR1BP42025 376 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 ACTR1AP61163 376 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 ERV3-1Q14264 604 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 HNRNPA1L2Q32P51 320 aaKnown RBP11.07□□□□□ -0.64
USHBP1-201ENST00000252597 TMEM255AQ5JRV8 349 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 SLC48A1Q6P1K1 146 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 NLRC3Q7RTR2 1065 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 OR4K14Q8NGD5 310 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 CCL4L1Q8NHW4 92 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 TSACCQ96A04 125 aaPredicted RBP11.07□□□□□ -0.64
USHBP1-201ENST00000252597 CXorf58Q96LI9 332 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 NOX3Q9HBY0 568 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 TMEM74BQ9NUR3 256 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 CLDND1Q9NY35 253 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 A0A1W2PPV9 198 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 SLC22A31A6NKX4 558 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 VEGFDO43915 354 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 OR8G3PP0DMU2 310 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 F3P13726 295 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 RBMS1P29558 406 aaKnown RBP11.07□□□□□ -0.64
USHBP1-201ENST00000252597 CMPK1P30085 196 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 TLX1P31314 330 aaPredicted RBP11.07□□□□□ -0.64
USHBP1-201ENST00000252597 RPE65Q16518 533 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 DUSP6Q16828 381 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 GARNL3Q5VVW2 1013 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 FAAH2Q6GMR7 532 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 ELP2Q6IA86 826 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 NRROSQ86YC3 692 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 NRSN1Q8IZ57 195 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 VWCEQ96DN2 955 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 WDR34Q96EX3 536 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 MNTQ99583 582 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 PCBD2Q9H0N5 130 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 TCF7L1Q9HCS4 588 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 SLC6A20Q9NP91 592 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 ASB6Q9NWX5 421 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 CALML5Q9NZT1 146 aa11.07□□□□□ -0.64
USHBP1-201ENST00000252597 CDK2AP1O14519 115 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 PRICKLE3O43900 615 aaPredicted RBP11.06□□□□□ -0.64
USHBP1-201ENST00000252597 CLEC3AO75596 197 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 SLC35G6P0C7Q6 338 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 EN2P19622 333 aaPredicted RBP11.06□□□□□ -0.64
USHBP1-201ENST00000252597 VASPP50552 380 aaPredicted RBP11.06□□□□□ -0.64
USHBP1-201ENST00000252597 AKR1C2P52895 323 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 AKR1C1Q04828 323 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 HTR4Q13639 388 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 ALG10BQ5I7T1 473 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 METRNLQ641Q3 311 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 FAM198BQ6UWH4 519 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 ENPP7Q6UWV6 458 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 C17orf107Q6ZR85 190 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 ZAR1Q86SH2 424 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 GLRX5Q86SX6 157 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 GALNT6Q8NCL4 622 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 LINC00052Q96N35 136 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 KCNJ15Q99712 375 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 ZNF436Q9C0F3 470 aaPredicted RBP11.06□□□□□ -0.64
USHBP1-201ENST00000252597 RSPH9Q9H1X1 276 aaPredicted RBP11.06□□□□□ -0.64
USHBP1-201ENST00000252597 GHITMQ9H3K2 345 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 SRMSQ9H3Y6 488 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 KCNK15Q9H427 330 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 MTHFD2LQ9H903 347 aaPredicted RBP11.06□□□□□ -0.64
USHBP1-201ENST00000252597 PELI2Q9HAT8 420 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 IL21RQ9HBE5 538 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 PRDM7Q9NQW5 492 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 DLL4Q9NR61 685 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 PHPT1Q9NRX4 125 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms