RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 SMU1Q2TAY7 513 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 ARHGAP11BQ3KRB8 267 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 SPDYE7PQ495Y7 208 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 SYT14P1Q58G82 188 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 TIMM23BQ5SRD1 257 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 C11orf71Q6IPW1 123 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 TMPPEQ6ZT21 453 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 SSX8Q7RTT4 187 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 OLIG3Q7RTU3 272 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 P2RY8Q86VZ1 359 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 CLECL1Q8IZS7 167 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 TMCO5AQ8N6Q1 288 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 ZNF433Q8N7K0 673 aaPredicted RBP9.1□□□□□ -0.95
VPS50-201ENST00000251739 ZNF614Q8N883 585 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 FNDC5Q8NAU1 212 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 MAPK1IP1LQ8NDC0 245 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 ATP6V1C2Q8NEY4 427 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 AGR3Q8TD06 166 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 TCP10LQ8TDR4 215 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 TRMT61AQ96FX7 289 aaKnown RBP9.1□□□□□ -0.95
VPS50-201ENST00000251739 ZIM3Q96PE6 472 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 ACER3Q9NUN7 267 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 MALT1Q9UDY8 824 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 RNF103-CHMP3A0A140T963 221 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 OR5H1A6NKK0 313 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 DUXAA6NLW8 204 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 RNASET2O00584 256 aaKnown RBP9.09□□□□□ -0.95
VPS50-201ENST00000251739 ANKRD28O15084 1053 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 DNPH1O43598 174 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 CD5LO43866 347 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 TYROBPO43914 113 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 STX11O75558 287 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 BPGMP07738 259 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 CREB1P16220 341 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 NTF4P34130 210 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 PGM1P36871 562 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 CCR4P51679 360 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 SLC16A1P53985 500 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 CDH11P55287 796 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 EMX2Q04743 252 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 PPA1Q15181 289 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 OR4F3Q6IEY1 312 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 BHLHB9Q6PI77 547 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.09□□□□□ -0.95
VPS50-201ENST00000251739 C6orf120Q7Z4R8 191 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 GALNT5Q7Z7M9 940 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 OR8J2Q8NGG1 315 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 SLC25A43Q8WUT9 341 aaPredicted RBP9.09□□□□□ -0.95
VPS50-201ENST00000251739 TUBGCP3Q96CW5 907 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 OR5B2Q96R09 309 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 PRPF18Q99633 342 aaKnown RBP9.09□□□□□ -0.95
VPS50-201ENST00000251739 THUMPD3Q9BV44 507 aaKnown RBP9.09□□□□□ -0.95
VPS50-201ENST00000251739 CCDC106Q9BWC9 280 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 MKLN1Q9UL63 735 aa9.09□□□□□ -0.95
VPS50-201ENST00000251739 TLDC2A0PJX2 215 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 C9JVG2 144 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 PDLIM1O00151 329 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 TLX2O43763 284 aaPredicted RBP9.08□□□□□ -0.96
VPS50-201ENST00000251739 ADAM11O75078 769 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 SPAG7O75391 227 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 CSTAP01040 98 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 UBTFL6P0CB48 400 aaPredicted RBP9.08□□□□□ -0.96
VPS50-201ENST00000251739 GGT1P19440 569 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 PGCP20142 388 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 SOAT1P35610 550 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 CSNK2A1P68400 391 aaPredicted RBP9.08□□□□□ -0.96
VPS50-201ENST00000251739 PHC1P78364 1004 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 MERTKQ12866 999 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 FAPQ12884 760 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 MAD2L1Q13257 205 aaPredicted RBP9.08□□□□□ -0.96
VPS50-201ENST00000251739 GPR68Q15743 365 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 FBXW9Q5XUX1 488 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 TYW3Q6IPR3 259 aaKnown RBP9.08□□□□□ -0.96
VPS50-201ENST00000251739 EMBQ6PCB8 327 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 FRRS1Q6ZNA5 592 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 EIF3MQ7L2H7 374 aaKnown RBP9.08□□□□□ -0.96
VPS50-201ENST00000251739 MTDHQ86UE4 582 aaKnown RBP9.08□□□□□ -0.96
VPS50-201ENST00000251739 CLEC4FQ8N1N0 589 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 RFWD2Q8NHY2 731 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 TMEM234Q8WY98 164 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 SLC35G5Q96KT7 338 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 AMBRA1Q9C0C7 1298 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 BARX1Q9HBU1 254 aaPredicted RBP9.08□□□□□ -0.96
VPS50-201ENST00000251739 EXOSC3Q9NQT5 275 aaKnown RBP9.08□□□□□ -0.96
VPS50-201ENST00000251739 POLE3Q9NRF9 147 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 CISD1Q9NZ45 108 aaKnown RBP9.08□□□□□ -0.96
VPS50-201ENST00000251739 NOP53Q9NZM5 478 aaKnown RBP9.08□□□□□ -0.96
VPS50-201ENST00000251739 EMC3Q9P0I2 261 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 SLC25A15Q9Y619 301 aa9.08□□□□□ -0.96
VPS50-201ENST00000251739 PRAMEF27A3QJZ7 478 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 E7EQL1 145 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 SULT2B1O00204 365 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 ABCD4O14678 606 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 CFLARO15519 480 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 PMS2P2O95744 297 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 MATN1P21941 496 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 APOBEC1P41238 236 aaKnown RBP9.07□□□□□ -0.96
VPS50-201ENST00000251739 FOXG1P55316 489 aaPredicted RBP9.07□□□□□ -0.96
VPS50-201ENST00000251739 H3F3AP84243 136 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 STK11Q15831 433 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms