RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 NLGN3Q9NZ94 848 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 KCNN3Q9UGI6 736 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 SPTBP11277 2137 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 TEX13CA0A0J9YWL9 993 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 DAPL1A0PJW8 107 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 SLC9B1P1A6NJY1 282 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 TBXA2RP21731 343 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 PDX1P52945 283 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 UBE2IP63279 158 aaKnown RBP15.67■□□□□ 0.1
FOXA1-201ENST00000250448 ZIC1Q15915 447 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 SLC36A2Q495M3 483 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 TJAP1Q5JTD0 557 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 MRM1Q6IN84 353 aaKnown RBP15.67■□□□□ 0.1
FOXA1-201ENST00000250448 IDO2Q6ZQW0 420 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 MEPCEQ7L2J0 689 aaKnown RBP15.67■□□□□ 0.1
FOXA1-201ENST00000250448 OR8H3Q8N146 312 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 ACOT4Q8N9L9 421 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 OR9A2Q8NGT5 310 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 RSC1A1Q92681 617 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 EVA1BQ9NVM1 165 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 HRASLS2Q9NWW9 162 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 B8ZZF3 427 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 CTSVO60911 334 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 TCRBP04435 133 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 ZGLP1P0C6A0 271 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 STXBP1P61764 594 aaKnown RBP15.67■□□□□ 0.1
FOXA1-201ENST00000250448 RGS1Q08116 209 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 DEFB133Q30KQ1 61 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 ZNF425Q6IV72 752 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 LYPD4Q6UWN0 246 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 TPRA1Q86W33 373 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 LSRQ86X29 649 aaPredicted RBP15.67■□□□□ 0.1
FOXA1-201ENST00000250448 KCT2Q8NC54 265 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 CADM4Q8NFZ8 388 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 OR10H4Q8NGA5 316 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 BRIX1Q8TDN6 353 aaKnown RBP15.67■□□□□ 0.1
FOXA1-201ENST00000250448 MS4A6EQ96DS6 147 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 AHCYL2Q96HN2 611 aaKnown RBP15.67■□□□□ 0.1
FOXA1-201ENST00000250448 SPACA7Q96KW9 195 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 UCKL1Q9NWZ5 548 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 CES1P1Q9UKY3 287 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 SLC7A7Q9UM01 511 aa15.67■□□□□ 0.1
FOXA1-201ENST00000250448 SCN2AQ99250 2005 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 ASXL3Q9C0F0 2248 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 FCMRO60667 390 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 ATP5A1P25705 553 aaKnown RBP15.66■□□□□ 0.1
FOXA1-201ENST00000250448 FNTBP49356 437 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 BLKP51451 505 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 SLC48A1Q6P1K1 146 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 FANK1Q8TC84 345 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 ELP4Q96EB1 424 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 OR52D1Q9H346 318 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 HEXA-AS1Q9H8Q6 139 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 KRCC1Q9NPI7 259 aaPredicted RBP15.66■□□□□ 0.1
FOXA1-201ENST00000250448 PRDM7Q9NQW5 492 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 ZNF443Q9Y2A4 671 aaPredicted RBP15.66■□□□□ 0.1
FOXA1-201ENST00000250448 TEX51A0A1B0GUA7 166 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 UNC119BA6NIH7 251 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 E9PI62 339 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 FZD7O75084 574 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 CD53P19397 219 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 CXCL3P19876 107 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 PPM1FP49593 454 aaPredicted RBP15.66■□□□□ 0.1
FOXA1-201ENST00000250448 IKZF1Q13422 519 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 GALEQ14376 348 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 TRAM1Q15629 374 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 COL28A1Q2UY09 1125 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 ABHD17CQ6PCB6 329 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 CEACAM19Q7Z692 300 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 TOR1AIP2Q8NFQ8 470 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 LRRC20Q8TCA0 184 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 UQCC2Q9BRT2 126 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 FN3KQ9H479 309 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 TECTAO75443 2155 aa15.66■□□□□ 0.1
FOXA1-201ENST00000250448 MT-ND5P03915 603 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 CERS1P27544 350 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 SLC25A35Q3KQZ1 300 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 RNASE12Q5GAN4 147 aaKnown RBP15.65■□□□□ 0.1
FOXA1-201ENST00000250448 PAQR7Q86WK9 346 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 SHISA5Q8N114 240 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 TOMM5Q8N4H5 51 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 C1orf216Q8TAB5 229 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 KAT2AQ92830 837 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 KISS1RQ969F8 398 aaPredicted RBP15.65■□□□□ 0.1
FOXA1-201ENST00000250448 YIPF5Q969M3 257 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 HCAR1Q9BXC0 346 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 ACTRT3Q9BYD9 372 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 ERVMER34-1Q9H9K5 563 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 KLHL1Q9NR64 748 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 POT1Q9NUX5 634 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 RNF215Q9Y6U7 377 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 LOC105369274A0A096LPK9 316 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 CD3GP09693 182 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 NME1P15531 152 aaKnown RBP15.65■□□□□ 0.1
FOXA1-201ENST00000250448 MPIP34949 423 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 E2F1Q01094 437 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 SLC3A1Q07837 685 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 LTB4RQ15722 352 aa15.65■□□□□ 0.1
FOXA1-201ENST00000250448 FBXO42Q6P3S6 717 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms