RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 SMAP2Q8WU79 429 aaPredicted RBP15.13■□□□□ 0.01
HOXD3-201ENST00000249440 PATE1Q8WXA2 126 aa15.13■□□□□ 0.01
HOXD3-201ENST00000249440 MRGPRX1Q96LB2 322 aa15.13■□□□□ 0.01
HOXD3-201ENST00000249440 ERMAPQ96PL5 475 aaPredicted RBP15.13■□□□□ 0.01
HOXD3-201ENST00000249440 CCDC3Q9BQI4 270 aa15.13■□□□□ 0.01
HOXD3-201ENST00000249440 GTPBP2Q9BX10 602 aaKnown RBP15.13■□□□□ 0.01
HOXD3-201ENST00000249440 MCCC2Q9HCC0 563 aa15.13■□□□□ 0.01
HOXD3-201ENST00000249440 SERTAD3Q9UJW9 196 aa15.13■□□□□ 0.01
HOXD3-201ENST00000249440 GUSBP08236 651 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 AGFG1P52594 562 aaKnown RBP15.12■□□□□ 0.01
HOXD3-201ENST00000249440 DLX2Q07687 328 aaPredicted RBP15.12■□□□□ 0.01
HOXD3-201ENST00000249440 MRPL28Q13084 256 aaKnown RBP15.12■□□□□ 0.01
HOXD3-201ENST00000249440 ZC3H14Q6PJT7 736 aaKnown RBP15.12■□□□□ 0.01
HOXD3-201ENST00000249440 KIAA1324Q6UXG2 1013 aaKnown RBP15.12■□□□□ 0.01
HOXD3-201ENST00000249440 TMEM184AQ6ZMB5 413 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 GPR135Q8IZ08 494 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 OR52E2Q8NGJ4 325 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 DNAJB12Q9NXW2 375 aaKnown RBP15.12■□□□□ 0.01
HOXD3-201ENST00000249440 CACNG2Q9Y698 323 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 EEF1E1O43324 174 aaKnown RBP15.12■□□□□ 0.01
HOXD3-201ENST00000249440 CPNE3O75131 537 aaKnown RBP15.12■□□□□ 0.01
HOXD3-201ENST00000249440 NGFRP08138 427 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 TFPIP10646 304 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 EMDP50402 254 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 ACTA2P62736 377 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 ACTG2P63267 376 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 FHL1Q13642 323 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 SLC25A35Q3KQZ1 300 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 PLA1AQ53H76 456 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 SNAP47Q5SQN1 464 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 ULK3Q6PHR2 472 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 DGAT2L6Q6ZPD8 337 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 SSX6Q7RTT6 188 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 DTX3Q8N9I9 347 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 PEX11GQ96HA9 241 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 ABHD1Q96SE0 405 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 LMF2Q9BU23 707 aaKnown RBP15.12■□□□□ 0.01
HOXD3-201ENST00000249440 GALNT9Q9HCQ5 603 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.12■□□□□ 0.01
HOXD3-201ENST00000249440 STARD5Q9NSY2 213 aa15.12■□□□□ 0.01
HOXD3-201ENST00000249440 TRAV1-2A0A0B4J238 106 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 A0A1B0GVC2 190 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 A6NIN4 97 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 ADAM11O75078 769 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 NDUFB2O95178 105 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 DHFRP00374 187 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 OR2T7P0C7T2 308 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 ZNF24P17028 368 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 AKT2P31751 481 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 CTHP32929 405 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 LINC00114Q6XXX2 140 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 KRT74Q7RTS7 529 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 ZNF550Q7Z398 422 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 POMGNT2Q8NAT1 580 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 FAM98AQ8NCA5 519 aaKnown RBP15.11■□□□□ 0.01
HOXD3-201ENST00000249440 OR2T27Q8NH04 317 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 THAP4Q8WY91 577 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 ST6GALNAC2Q9UJ37 374 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 LRP4O75096 1905 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 A0A1W2PRG6 482 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 RDH16O75452 317 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 ARL6IP5O75915 188 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 ALX3O95076 343 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 TNFP01375 233 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 HYAL1Q12794 435 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 RAB30Q15771 203 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 NTRK2Q16620 822 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 ZSWIM7Q19AV6 140 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 Q6ZSR6 202 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 OOSP2Q86WS3 158 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 SYS1Q8N2H4 156 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 CADM2Q8N3J6 435 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 SDR9C7Q8NEX9 313 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 SMIM19Q96E16 107 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 ABRACLQ9P1F3 81 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 RPS6KB2Q9UBS0 482 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 CHRNA9Q9UGM1 479 aa15.11■□□□□ 0.01
HOXD3-201ENST00000249440 OGG1O15527 345 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 TPMTP51580 245 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 GBX2P52951 348 aaPredicted RBP15.1■□□□□ 0.01
HOXD3-201ENST00000249440 PITPNAQ00169 270 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 TP53I3Q53FA7 332 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 C1QTNF12Q5T7M4 302 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 OR4N2Q8NGD1 307 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 OR4K13Q8NH42 304 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 GPBAR1Q8TDU6 330 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 ZMYND19Q96E35 227 aaPredicted RBP15.1■□□□□ 0.01
HOXD3-201ENST00000249440 CNN2Q99439 309 aaKnown RBP15.1■□□□□ 0.01
HOXD3-201ENST00000249440 ZNF576Q9H609 170 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 MKKSQ9NPJ1 570 aaPredicted RBP15.1■□□□□ 0.01
HOXD3-201ENST00000249440 OR5K4A6NMS3 321 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 NOTOA8MTQ0 251 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 HIST1H1CP16403 213 aaKnown RBP15.1■□□□□ 0.01
HOXD3-201ENST00000249440 S1PR1P21453 382 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 EVI2BP34910 448 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 UBE2IP63279 158 aaKnown RBP15.1■□□□□ 0.01
HOXD3-201ENST00000249440 OR13C5Q8NGS8 318 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 OR9A4Q8NGU2 314 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 RIT1Q92963 219 aa15.1■□□□□ 0.01
HOXD3-201ENST00000249440 RBM18Q96H35 190 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms