RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 TMEM53Q6P2H8 277 aa17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 ZNF550Q7Z398 422 aa17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 ZNF595Q8IYB9 648 aa17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 ABHD4Q8TB40 342 aa17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 FRMD6Q96NE9 622 aa17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 Q9N2J8 555 aa17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 TMEM184BQ9Y519 407 aaPredicted RBP17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 MCIDASD6RGH6 385 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 MAGEB4O15481 346 aaPredicted RBP17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 PRKNO60260 465 aaPredicted RBP17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 SLC19A2O60779 497 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 PRAMEF2O60811 474 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 TFP02787 698 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 TRILQ7L0X0 811 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 CEACAM19Q7Z692 300 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 BCORP1Q8N888 145 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 OR51L1Q8NGJ5 315 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 SLC2A12Q8TD20 617 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 ACOT12Q8WYK0 555 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 SLC35B4Q969S0 331 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 TP53INP1Q96A56 240 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 ZMYND19Q96E35 227 aaPredicted RBP17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 DMRTB1Q96MA1 342 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 KCNJ15Q99712 375 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 EXTL2Q9UBQ6 330 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 MRPS33Q9Y291 106 aaKnown RBP17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 ADAM18Q9Y3Q7 739 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 A0A0G2JMP0 313 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 A0A0X1KG70 313 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 IFNGP01579 166 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 FAM157BP0CG42 384 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 ATXN8OSP0DMR3 200 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 CD53P19397 219 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 PYCR1P32322 319 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 DMKNQ6E0U4 476 aaPredicted RBP17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 OR4M2Q8NGB6 313 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 OR13C5Q8NGS8 318 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 PCDH15Q96QU1 1955 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 OR10A5Q9H207 317 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 RBFOX1Q9NWB1 397 aaKnown RBP17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 RPS6KB2Q9UBS0 482 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 NUFIP1Q9UHK0 495 aaKnown RBP17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 ADAM30Q9UKF2 790 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 IER3IP1Q9Y5U9 82 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 CLCA3PQ9Y6N3 262 aa17.94■□□□□ 0.46
CDC42EP1-201ENST00000249014 NDUFB2O95178 105 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 CSTAP01040 98 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 TRAPPC2P0DI81 140 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 TRAPPC2BP0DI82 140 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 GXYLT1Q4G148 440 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 PXKQ7Z7A4 578 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 FAM98AQ8NCA5 519 aaKnown RBP17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 SLC7A6Q92536 515 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 TCTN2Q96GX1 697 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 ZC3HAV1LQ96H79 300 aaKnown RBP17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 LMF1Q96S06 567 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 UBL7Q96S82 380 aaPredicted RBP17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 G6PC3Q9BUM1 346 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 DDX28Q9NUL7 540 aaKnown RBP17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 ITGB1BP2Q9UKP3 347 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 A0A0G2JK05 382 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 CLDN4O14493 209 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 LYRM1O43325 122 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 NSA2O95478 260 aaKnown RBP17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 EIF4EP06730 217 aaKnown RBP17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 PSKH1P11801 424 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 CAPZBP47756 277 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 GABRA4P48169 554 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 TAS2R43P59537 309 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 ACTC1P68032 377 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 ACTA1P68133 377 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 FUT7Q11130 342 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 QPRTQ15274 297 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 TP53I3Q53FA7 332 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 SFXN4Q6P4A7 337 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 SLC43A2Q8N370 569 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 DTX3Q8N9I9 347 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 ZNRF4Q8WWF5 429 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 GHSRQ92847 366 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 SGTBQ96EQ0 304 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 MMABQ96EY8 250 aaPredicted RBP17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 CCDC86Q9H6F5 360 aaKnown RBP17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 MKKSQ9NPJ1 570 aaPredicted RBP17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 ST6GALNAC2Q9UJ37 374 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 RASD1Q9Y272 281 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 OR10H1Q9Y4A9 318 aa17.93■□□□□ 0.46
CDC42EP1-201ENST00000249014 MPDZO75970 2070 aa17.92■□□□□ 0.46
CDC42EP1-201ENST00000249014 A0A0C4DFX4 3053 aa17.92■□□□□ 0.46
CDC42EP1-201ENST00000249014 A0A087WUJ7 227 aa17.92■□□□□ 0.46
CDC42EP1-201ENST00000249014 SERINC4A6NH21 518 aa17.92■□□□□ 0.46
CDC42EP1-201ENST00000249014 IMPA2O14732 288 aa17.92■□□□□ 0.46
CDC42EP1-201ENST00000249014 IDH3BO43837 385 aa17.92■□□□□ 0.46
CDC42EP1-201ENST00000249014 CLPSP04118 112 aa17.92■□□□□ 0.46
CDC42EP1-201ENST00000249014 POU4F2Q12837 409 aa17.92■□□□□ 0.46
CDC42EP1-201ENST00000249014 TRAM1Q15629 374 aa17.92■□□□□ 0.46
CDC42EP1-201ENST00000249014 ZFP69Q49AA0 526 aa17.92■□□□□ 0.46
CDC42EP1-201ENST00000249014 PLET1Q6UQ28 207 aa17.92■□□□□ 0.46
CDC42EP1-201ENST00000249014 SLC7A5P1Q8MH63 180 aa17.92■□□□□ 0.46
CDC42EP1-201ENST00000249014 DEFB119Q8N690 84 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms