RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 CYTIPO60759 359 aa18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 NUDT7P0C024 238 aa18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 GKN3PP0CG01 181 aa18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 HTR3AP46098 478 aa18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 POLR2HP52434 150 aaKnown RBP18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 EPS8Q12929 822 aa18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 C22orf34Q6ZV56 151 aa18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 CXorf67Q86X51 503 aaPredicted RBP18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 ADGRG3Q86Y34 549 aa18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 MAL2Q969L2 176 aa18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 ZNF775Q96BV0 537 aaPredicted RBP18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 ZHX1-C8orf76Q96EF9 292 aa18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 ZNF300Q96RE9 604 aaPredicted RBP18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 FOXC2Q99958 501 aa18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 NPHS2Q9NP85 383 aa18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 SLC25A37Q9NYZ2 338 aa18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 DCTN4Q9UJW0 460 aa18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 TMED7Q9Y3B3 224 aa18.8■□□□□ 0.6
HCFC1R1-201ENST00000248089 CDHR4A6H8M9 788 aa18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 ATE1O95260 518 aa18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 PPP3CBP16298 524 aa18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 HOXB9P17482 250 aaPredicted RBP18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 NCF2P19878 526 aaPredicted RBP18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 TACR3P29371 465 aa18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 ATP4BP51164 291 aa18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 FADDQ13158 208 aa18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 LARS2Q15031 903 aaKnown RBP18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 ALKBH2Q6NS38 261 aa18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 WFDC8Q8IUA0 241 aa18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 ZNF440Q8IYI8 595 aa18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 BCO1Q9HAY6 547 aa18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 SLAMF8Q9P0V8 285 aa18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 OSGIN1Q9UJX0 560 aa18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 ING1Q9UK53 422 aaPredicted RBP18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 HDGFL3Q9Y3E1 203 aa18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 PRRC2AP48634 2157 aaKnown RBP18.79■□□□□ 0.6
HCFC1R1-201ENST00000248089 A0A0G2JPF8 293 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 TMEM72A0PK05 275 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 HNRNPCL2B2RXH8 293 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 HNRNPCL3B7ZW38 293 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 C5orf58C9J3I9 102 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 HNRNPCL1O60812 293 aaKnown RBP18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 PMS2P2O95744 297 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 THBDP07204 575 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 HNRNPCL4P0DMR1 293 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 SLC1A3P43003 542 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 OR2B6P58173 313 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 TSC22D1Q15714 1073 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 PAGE3Q5JUK9 113 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 LRIF1Q5T3J3 769 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 ABLIM2Q6H8Q1 611 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 MSRB3Q8IXL7 192 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 CADM2Q8N3J6 435 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 DDIT4LQ96D03 193 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 HS3ST6Q96QI5 342 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 UBTD1Q9HAC8 227 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 A4GALTQ9NPC4 353 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 GPR52Q9Y2T5 361 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 PRR14LQ5THK1 2151 aa18.78■□□□□ 0.6
HCFC1R1-201ENST00000248089 FAAHO00519 579 aa18.77■□□□□ 0.6
HCFC1R1-201ENST00000248089 GCM2O75603 506 aaPredicted RBP18.77■□□□□ 0.6
HCFC1R1-201ENST00000248089 THBS1P07996 1170 aa18.77■□□□□ 0.6
HCFC1R1-201ENST00000248089 PSMB1P20618 241 aaKnown RBP18.77■□□□□ 0.6
HCFC1R1-201ENST00000248089 IL32P24001 234 aa18.77■□□□□ 0.6
HCFC1R1-201ENST00000248089 GCNT6Q5T4J0 391 aa18.77■□□□□ 0.6
HCFC1R1-201ENST00000248089 RNF220Q5VTB9 566 aa18.77■□□□□ 0.6
HCFC1R1-201ENST00000248089 MTDHQ86UE4 582 aaKnown RBP18.77■□□□□ 0.6
HCFC1R1-201ENST00000248089 GABRG1Q8N1C3 465 aa18.77■□□□□ 0.6
HCFC1R1-201ENST00000248089 S100PBPQ96BU1 408 aa18.77■□□□□ 0.6
HCFC1R1-201ENST00000248089 PRSS50Q9UI38 385 aa18.77■□□□□ 0.6
HCFC1R1-201ENST00000248089 ZNF232Q9UNY5 417 aa18.77■□□□□ 0.6
HCFC1R1-201ENST00000248089 EDF1O60869 148 aaKnown RBP18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 ADAP00813 363 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 FKBP2P26885 142 aaKnown RBP18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 OR3A2P47893 321 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 CLK1P49759 484 aaKnown RBP18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 COPZ1P61923 177 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 IRX1P78414 480 aaPredicted RBP18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 ZNF311Q5JNZ3 666 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 GALNT5Q7Z7M9 940 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 ZNF100Q8IYN0 542 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 CLIP4Q8N3C7 705 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 STEAP2Q8NFT2 490 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 NFKBIDQ8NI38 313 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 BBS10Q8TAM1 723 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 PIGXQ8TBF5 258 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 KISS1RQ969F8 398 aaPredicted RBP18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 ALPK1Q96QP1 1244 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 CXXC4Q9H2H0 198 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 RABEP2Q9H5N1 569 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 ARMC7Q9H6L4 198 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 SLC52A3Q9NQ40 469 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 EMC3Q9P0I2 261 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 VAPAQ9P0L0 249 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 TMEM181Q9P2C4 612 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 IFT52Q9Y366 437 aa18.76■□□□□ 0.59
HCFC1R1-201ENST00000248089 RAI1Q7Z5J4 1906 aaPredicted RBP18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 A0A0G2JND7 137 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms