RNA–Protein interactions for RNA: ENST00000244520.9

SNRPC-201, Transcript of small nuclear ribonucleoprotein polypeptide C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPC, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPC-201ENST00000244520 GNA13Q14344 377 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 CAPRIN1Q14444 709 aaKnown RBP12.15□□□□□ -0.46
SNRPC-201ENST00000244520 GLIPR1L2Q4G1C9 344 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 ZNF311Q5JNZ3 666 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 GCNT6Q5T4J0 391 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 EEF1A1P5Q5VTE0 462 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 CGB2Q6NT52 195 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 STAC2Q6ZMT1 411 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 TMPPEQ6ZT21 453 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 GRINAQ7Z429 371 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 RETREG3Q86VR2 466 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 COMTD1Q86VU5 262 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 HS3ST6Q96QI5 342 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 PSD2Q9BQI7 771 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 PIF1Q9H611 641 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 EXOSC3Q9NQT5 275 aaKnown RBP12.15□□□□□ -0.46
SNRPC-201ENST00000244520 ST6GALNAC2Q9UJ37 374 aa12.15□□□□□ -0.46
SNRPC-201ENST00000244520 DSPPQ9NZW4 1301 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 CDHR4A6H8M9 788 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 ADAP00813 363 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 THBDP07204 575 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 YES1P07947 543 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 GUSBP08236 651 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 IMPDH2P12268 514 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 ACAA2P42765 397 aaKnown RBP12.14□□□□□ -0.47
SNRPC-201ENST00000244520 ATP4BP51164 291 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 POLR2HP52434 150 aaKnown RBP12.14□□□□□ -0.47
SNRPC-201ENST00000244520 MTPNP58546 118 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 RNPS1Q15287 305 aaKnown RBP12.14□□□□□ -0.47
SNRPC-201ENST00000244520 LRIF1Q5T3J3 769 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 GTF2IRD2BQ6EKJ0 949 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 TFAP2EQ6VUC0 442 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 DHDDSQ86SQ9 333 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 GTF2IRD2Q86UP8 949 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 ACTR6Q9GZN1 396 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 ZNF385DQ9H6B1 395 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 UBTD1Q9HAC8 227 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 CACYBPQ9HB71 228 aaKnown RBP12.14□□□□□ -0.47
SNRPC-201ENST00000244520 A4GALTQ9NPC4 353 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 ELOVL5Q9NYP7 299 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 CALML5Q9NZT1 146 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 VPS13CQ709C8 3753 aa12.14□□□□□ -0.47
SNRPC-201ENST00000244520 A0A0G2JPF8 293 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 A0A1W2PP18 115 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 DEFB108AA8MXU0 73 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 HNRNPCL2B2RXH8 293 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 HNRNPCL3B7ZW38 293 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 TPST1O60507 370 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 CYTIPO60759 359 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 HNRNPCL1O60812 293 aaKnown RBP12.13□□□□□ -0.47
SNRPC-201ENST00000244520 LYZL6O75951 148 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 PGM3O95394 542 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 PABPC4LP0CB38 370 aaKnown RBP12.13□□□□□ -0.47
SNRPC-201ENST00000244520 HNRNPCL4P0DMR1 293 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 ARAFP10398 606 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 SLC1A3P43003 542 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 MRPL19P49406 292 aaKnown RBP12.13□□□□□ -0.47
SNRPC-201ENST00000244520 TXNL4AP83876 142 aaKnown RBP12.13□□□□□ -0.47
SNRPC-201ENST00000244520 SCARB2Q14108 478 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 LARS2Q15031 903 aaKnown RBP12.13□□□□□ -0.47
SNRPC-201ENST00000244520 DLEU7Q6UYE1 221 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 ATG4DQ86TL0 474 aaPredicted RBP12.13□□□□□ -0.47
SNRPC-201ENST00000244520 STK32CQ86UX6 486 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 P3H2Q8IVL5 708 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 CMIPQ8IY22 773 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 RNF217Q8TC41 542 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 S100PBPQ96BU1 408 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 CPPED1Q9BRF8 314 aaPredicted RBP12.13□□□□□ -0.47
SNRPC-201ENST00000244520 RAD21L1Q9H4I0 556 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 PLEKHF2Q9H8W4 249 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 GLRX2Q9NS18 164 aa12.13□□□□□ -0.47
SNRPC-201ENST00000244520 LEF1Q9UJU2 399 aaPredicted RBP12.13□□□□□ -0.47
SNRPC-201ENST00000244520 SPIN1Q9Y657 262 aaPredicted RBP12.13□□□□□ -0.47
SNRPC-201ENST00000244520 TEP1Q99973 2627 aaKnown RBP12.12□□□□□ -0.47
SNRPC-201ENST00000244520 TRBV5-3A0A0A0MS03 114 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 ANGPT2O15123 496 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 PLAUP00749 431 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 OPN1SWP03999 348 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 FPR1P21462 350 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 DNASE1P24855 282 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 CXCR1P25024 350 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 ADSLP30566 484 aaPredicted RBP12.12□□□□□ -0.47
SNRPC-201ENST00000244520 NTF4P34130 210 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 CSNK2A1P68400 391 aaPredicted RBP12.12□□□□□ -0.47
SNRPC-201ENST00000244520 CDK6Q00534 326 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 NFYCQ13952 458 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 CEACAM7Q14002 265 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 KEAP1Q14145 624 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 OR7A5Q15622 319 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 STK11Q15831 433 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 RUNDC3AQ59EK9 446 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 C9orf135Q5VTT2 229 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 AP1ARQ63HQ0 302 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 BEND4Q6ZU67 534 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 ZNF100Q8IYN0 542 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 UBE2J2Q8N2K1 259 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 BBS10Q8TAM1 723 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 SLC25A43Q8WUT9 341 aaPredicted RBP12.12□□□□□ -0.47
SNRPC-201ENST00000244520 DDIT4LQ96D03 193 aa12.12□□□□□ -0.47
SNRPC-201ENST00000244520 WFDC6Q9BQY6 131 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms