RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 IGKV1D-16P01601 117 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 ZCCHC18P0CG32 403 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 UQCRC2P22695 453 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 ADH6P28332 368 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 SHC1P29353 583 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 GABRA3P34903 492 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 RNF144AP50876 292 aaPredicted RBP12.23□□□□□ -0.45
DDX39A-201ENST00000242776 CDH11P55287 796 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 MXRA7P84157 204 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 TRMT5Q32P41 509 aaKnown RBP12.23□□□□□ -0.45
DDX39A-201ENST00000242776 GLYR1Q49A26 553 aaPredicted RBP12.23□□□□□ -0.45
DDX39A-201ENST00000242776 PAGE3Q5JUK9 113 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 SFRP5Q5T4F7 317 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 CLEC2AQ6UVW9 174 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 TFAP2EQ6VUC0 442 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 DNAJC14Q6Y2X3 702 aaPredicted RBP12.23□□□□□ -0.45
DDX39A-201ENST00000242776 SZRD1Q7Z422 152 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 ZNF525Q8N782 197 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 ATP6V1C2Q8NEY4 427 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 OR56A1Q8NGH5 318 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 FBXO30Q8TB52 745 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 ROPN1LQ96C74 230 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 TNFRSF13CQ96RJ3 184 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 CACNG6Q9BXT2 260 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 TRIM2Q9C040 744 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 OR10A4Q9H209 315 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 NDE1Q9NXR1 346 aa12.23□□□□□ -0.45
DDX39A-201ENST00000242776 A0A096LNT2 108 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 IGHV3-15A0A0B4J1V0 119 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 RNF103-CHMP3A0A140T963 221 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 FBP2O00757 339 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 AIM2O14862 343 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 HNRNPCL1O60812 293 aaKnown RBP12.22□□□□□ -0.45
DDX39A-201ENST00000242776 LYZL6O75951 148 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 FESP07332 822 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 PPIBP23284 216 aaKnown RBP12.22□□□□□ -0.45
DDX39A-201ENST00000242776 CHI3L1P36222 383 aaPredicted RBP12.22□□□□□ -0.45
DDX39A-201ENST00000242776 NUDT2P50583 147 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 CARD18P57730 90 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 PSPHP78330 225 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 ZNHIT3Q15649 155 aaPredicted RBP12.22□□□□□ -0.45
DDX39A-201ENST00000242776 LRIF1Q5T3J3 769 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 C6orf89Q6UWU4 347 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 HACD2Q6Y1H2 254 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 ZNF621Q6ZSS3 439 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 BHLHA15Q7RTS1 189 aaPredicted RBP12.22□□□□□ -0.45
DDX39A-201ENST00000242776 RETREG3Q86VR2 466 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 GABRG1Q8N1C3 465 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 PIAS4Q8N2W9 510 aaPredicted RBP12.22□□□□□ -0.45
DDX39A-201ENST00000242776 HSD17B8Q92506 261 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 ELP4Q96EB1 424 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 REXO5Q96IC2 774 aaKnown RBP12.22□□□□□ -0.45
DDX39A-201ENST00000242776 INPP5KQ9BT40 448 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 HDHD5Q9BXW7 423 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 SRXN1Q9BYN0 137 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 CXorf36Q9H7Y0 433 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 GLRX2Q9NS18 164 aa12.22□□□□□ -0.45
DDX39A-201ENST00000242776 SIRT3Q9NTG7 399 aaPredicted RBP12.22□□□□□ -0.45
DDX39A-201ENST00000242776 ZCCHC3Q9NUD5 404 aaKnown RBP12.22□□□□□ -0.45
DDX39A-201ENST00000242776 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.22□□□□□ -0.45
DDX39A-201ENST00000242776 MRTO4Q9UKD2 239 aaKnown RBP12.22□□□□□ -0.45
DDX39A-201ENST00000242776 UPK1AO00322 258 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 ABCD4O14678 606 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 ATP5HO75947 161 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 KRT75O95678 551 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 KRT16P08779 473 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 ME2P23368 584 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 CDKN2CP42773 168 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 CCT3P49368 545 aaKnown RBP12.21□□□□□ -0.45
DDX39A-201ENST00000242776 ZNF41P51814 821 aaPredicted RBP12.21□□□□□ -0.45
DDX39A-201ENST00000242776 GTF2IRD2BQ6EKJ0 949 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 CCDC121Q6ZUS5 278 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 ESPNLQ6ZVH7 1005 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 GTF2IRD2Q86UP8 949 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 LILRA2Q8N149 483 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 OR2L13Q8N349 312 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 NUP43Q8NFH3 380 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 ZNF775Q96BV0 537 aaPredicted RBP12.21□□□□□ -0.45
DDX39A-201ENST00000242776 FAM120BQ96EK7 910 aaKnown RBP12.21□□□□□ -0.45
DDX39A-201ENST00000242776 OTUB1Q96FW1 271 aaPredicted RBP12.21□□□□□ -0.45
DDX39A-201ENST00000242776 ADAD1Q96M93 576 aaKnown RBP12.21□□□□□ -0.45
DDX39A-201ENST00000242776 MS4A4EQ96PG1 132 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 SLC35A5Q9BS91 424 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 PAIP1Q9H074 479 aaKnown RBP12.21□□□□□ -0.45
DDX39A-201ENST00000242776 RAD21L1Q9H4I0 556 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 MED17Q9NVC6 651 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 PAQR5Q9NXK6 330 aaPredicted RBP12.21□□□□□ -0.45
DDX39A-201ENST00000242776 PRSS50Q9UI38 385 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 CORO2BQ9UQ03 480 aa12.21□□□□□ -0.45
DDX39A-201ENST00000242776 SHISA9B4DS77 424 aa12.21□□□□□ -0.46
DDX39A-201ENST00000242776 ADAMDEC1O15204 470 aa12.21□□□□□ -0.46
DDX39A-201ENST00000242776 GSNP06396 782 aa12.21□□□□□ -0.46
DDX39A-201ENST00000242776 THBS1P07996 1170 aa12.21□□□□□ -0.46
DDX39A-201ENST00000242776 IGHV4-31P0DP07 118 aa12.21□□□□□ -0.46
DDX39A-201ENST00000242776 ZNF17P17021 662 aa12.21□□□□□ -0.46
DDX39A-201ENST00000242776 SRD5A1P18405 259 aa12.21□□□□□ -0.46
DDX39A-201ENST00000242776 RASSF2P50749 326 aa12.21□□□□□ -0.46
DDX39A-201ENST00000242776 ANXA11P50995 505 aaKnown RBP12.21□□□□□ -0.46
DDX39A-201ENST00000242776 PSMD4P55036 377 aaKnown RBP12.21□□□□□ -0.46
DDX39A-201ENST00000242776 RAC1P63000 192 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms