RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 PEX5LQ8IYB4 626 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 ANKS4BQ8N8V4 417 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 CCDC197Q8NCU1 140 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 ATP6V1C2Q8NEY4 427 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 OR10A6Q8NH74 314 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 BBS10Q8TAM1 723 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 MARVELD3Q96A59 401 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 RCN3Q96D15 328 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 CHST11Q9NPF2 352 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 CMTM6Q9NX76 183 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 THUMPD1Q9NXG2 353 aaKnown RBP12.26□□□□□ -0.45
VEGFA-201ENST00000230480 CALML5Q9NZT1 146 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 CLEC4AQ9UMR7 237 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 CSMD2Q7Z408 3487 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 CREBBPQ92793 2442 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 MRASO14807 208 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 SLC22A2O15244 555 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 NPIPB7O75200 414 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 LYPD3O95274 346 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 ATP6V1G2O95670 118 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 THY1P04216 161 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 COX4I1P13073 169 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 CD247P20963 164 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 PPIBP23284 216 aaKnown RBP12.25□□□□□ -0.45
VEGFA-201ENST00000230480 TACR3P29371 465 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 AQP1P29972 269 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 CARD18P57730 90 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 SELENBP1Q13228 472 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 NPTX1Q15818 432 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 LIN52Q52LA3 116 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 ZNF311Q5JNZ3 666 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 MEX3BQ6ZN04 569 aaKnown RBP12.25□□□□□ -0.45
VEGFA-201ENST00000230480 GRINAQ7Z429 371 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 SLC15A3Q8IY34 581 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 RNF128Q8TEB7 428 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 ABHD3Q8WU67 409 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 C3orf49Q96BT1 292 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 TAMM41Q96BW9 452 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 DTNBP1Q96EV8 351 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 DNAJA3Q96EY1 480 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 ZFP3Q96NJ6 502 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 SFXN3Q9BWM7 321 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 NSRP1Q9H0G5 558 aaKnown RBP12.25□□□□□ -0.45
VEGFA-201ENST00000230480 OPN3Q9H1Y3 402 aaPredicted RBP12.25□□□□□ -0.45
VEGFA-201ENST00000230480 RAD21L1Q9H4I0 556 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 PIF1Q9H611 641 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 AKAP9Q99996 3911 aa12.25□□□□□ -0.45
VEGFA-201ENST00000230480 TMED7-TICAM2A0A0A6YYA0 188 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 IGHV3-15A0A0B4J1V0 119 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 FAM221AA4D161 298 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 CCT8L1PA6NM43 557 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 FAM47E-STBD1D6RA91 191 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 M0QX08 132 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 DVL2O14641 736 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 HNRNPRO43390 633 aaKnown RBP12.24□□□□□ -0.45
VEGFA-201ENST00000230480 SS18L1O75177 396 aaPredicted RBP12.24□□□□□ -0.45
VEGFA-201ENST00000230480 CRHP06850 196 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 PRKAR1BP31321 381 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 CCKARP32238 428 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 APOBEC1P41238 236 aaKnown RBP12.24□□□□□ -0.45
VEGFA-201ENST00000230480 SLC1A3P43003 542 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 ASCL1P50553 236 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 EEFSECP57772 596 aaKnown RBP12.24□□□□□ -0.45
VEGFA-201ENST00000230480 ELF3P78545 371 aaPredicted RBP12.24□□□□□ -0.45
VEGFA-201ENST00000230480 HPCAP84074 193 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 H3F3AP84243 136 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 EGR4Q05215 589 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 BNIP2Q12982 314 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 SYT14P1Q58G82 188 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 TMPPEQ6ZT21 453 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 CCDC80Q76M96 950 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 NUFIP2Q7Z417 695 aaKnown RBP12.24□□□□□ -0.45
VEGFA-201ENST00000230480 ATG4DQ86TL0 474 aaPredicted RBP12.24□□□□□ -0.45
VEGFA-201ENST00000230480 RBM45Q8IUH3 476 aaKnown RBP12.24□□□□□ -0.45
VEGFA-201ENST00000230480 ZNF610Q8N9Z0 462 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 RP9Q8TA86 221 aaKnown RBP12.24□□□□□ -0.45
VEGFA-201ENST00000230480 RNASE6Q93091 150 aaKnown RBP12.24□□□□□ -0.45
VEGFA-201ENST00000230480 PLSCR4Q9NRQ2 329 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 TMED7Q9Y3B3 224 aa12.24□□□□□ -0.45
VEGFA-201ENST00000230480 IGKV1D-42A0A075B6H8 117 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 ZNF716A6NP11 495 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 EVPLLA8MZ36 301 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 FZD7O75084 574 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 OPN1SWP03999 348 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 CCNA2P20248 432 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 FUT4P22083 530 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 KCNJ5P48544 419 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 DIO1P49895 249 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 P2RY4P51582 365 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 RAC3P60763 192 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 RPS3AP61247 264 aaKnown RBP12.23□□□□□ -0.45
VEGFA-201ENST00000230480 SIRPAP78324 504 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 FAM27E3Q08E93 113 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 RBBP4Q09028 425 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 MYBPHQ13203 477 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 CYLC2Q14093 348 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-201ENST00000230480 SGCBQ16585 318 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 VMACQ2NL98 169 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 FAM214BQ7L5A3 538 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 CPLX4Q7Z7G2 160 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms