RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 UBQLN3Q9H347 655 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 UBQLN2Q9UHD9 624 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 RASD1Q9Y272 281 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 SIRT4Q9Y6E7 314 aaPredicted RBP18.98■□□□□ 0.63
SNX3-201ENST00000230085 FZD7O75084 574 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 C4BPBP20851 252 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 INSL4Q14641 139 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 LGALSLQ3ZCW2 172 aaPredicted RBP18.97■□□□□ 0.63
SNX3-201ENST00000230085 C6orf132Q5T0Z8 1188 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 GPAT4Q86UL3 456 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 LRRTM4Q86VH4 590 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 RNF113BQ8IZP6 322 aaKnown RBP18.97■□□□□ 0.63
SNX3-201ENST00000230085 SLC25A45Q8N413 288 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 MS4A15Q8N5U1 240 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 LMNTD1Q8N9Z9 388 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 OR5W2Q8NH69 310 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 LMX1AQ8TE12 382 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 KISS1RQ969F8 398 aaPredicted RBP18.97■□□□□ 0.63
SNX3-201ENST00000230085 OR2M4Q96R27 311 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 BBS4Q96RK4 519 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 C17orf62Q9BQA9 187 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 PLEKHA1Q9HB21 404 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 DLL4Q9NR61 685 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 HAO2Q9NYQ3 351 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 SLC23A2Q9UGH3 650 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 KIF25Q9UIL4 384 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 ASCC3Q8N3C0 2202 aaKnown RBP18.97■□□□□ 0.63
SNX3-201ENST00000230085 HEATR5BQ9P2D3 2071 aa18.97■□□□□ 0.63
SNX3-201ENST00000230085 LRIT2A6NDA9 550 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 SLC22A31A6NKX4 558 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 EEF1E1O43324 174 aaKnown RBP18.96■□□□□ 0.63
SNX3-201ENST00000230085 OR7A10O76100 309 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 TGM6O95932 706 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 IFI30P13284 250 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 PAICSP22234 425 aaKnown RBP18.96■□□□□ 0.63
SNX3-201ENST00000230085 AK4P27144 223 aaPredicted RBP18.96■□□□□ 0.63
SNX3-201ENST00000230085 EPHA8P29322 1005 aaPredicted RBP18.96■□□□□ 0.63
SNX3-201ENST00000230085 TGM3Q08188 693 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 MADCAM1Q13477 382 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 CLEC12AQ5QGZ9 265 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 CPOQ8IVL8 374 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 LNX2Q8N448 690 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 BBS1Q8NFJ9 593 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 SAP25Q8TEE9 199 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 TFGQ92734 400 aaPredicted RBP18.96■□□□□ 0.63
SNX3-201ENST00000230085 NXPE2Q96DL1 559 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 OR7D2Q96RA2 312 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 SARGQ9BW04 601 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 ISG20L2Q9H9L3 353 aaKnown RBP18.96■□□□□ 0.63
SNX3-201ENST00000230085 CES1P1Q9UKY3 287 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 CAMK2AQ9UQM7 478 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 ARID1BQ8NFD5 2236 aaPredicted RBP18.96■□□□□ 0.63
SNX3-201ENST00000230085 ARHGEF17Q96PE2 2063 aaPredicted RBP18.96■□□□□ 0.63
SNX3-201ENST00000230085 GVINP1Q7Z2Y8 2422 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 AGR2O95994 175 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 TRHRP34981 398 aaPredicted RBP18.96■□□□□ 0.63
SNX3-201ENST00000230085 ATP6V1E1P36543 226 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 CSNK1G2P78368 415 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 KLF9Q13886 244 aaPredicted RBP18.96■□□□□ 0.63
SNX3-201ENST00000230085 LASP1Q14847 261 aaKnown RBP18.96■□□□□ 0.63
SNX3-201ENST00000230085 AANATQ16613 207 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 FAM69AQ5T7M9 428 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 ASB18Q6ZVZ8 466 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 GDF7Q7Z4P5 450 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 OR8H3Q8N146 312 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 SLC43A2Q8N370 569 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 TOMM5Q8N4H5 51 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 EID2Q8N6I1 236 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 TRMT10AQ8TBZ6 339 aaKnown RBP18.96■□□□□ 0.63
SNX3-201ENST00000230085 CACNG6Q9BXT2 260 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 TMEM9BQ9NQ34 198 aa18.96■□□□□ 0.63
SNX3-201ENST00000230085 BHLHE40O14503 412 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 SOCS6O14544 535 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 THY1P04216 161 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 H2AFB2P0C5Z0 115 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 SHC1P29353 583 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 GCGRP47871 477 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 EXOSC2Q13868 293 aaKnown RBP18.95■□□□□ 0.62
SNX3-201ENST00000230085 SLC9A5Q14940 896 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 DMKNQ6E0U4 476 aaPredicted RBP18.95■□□□□ 0.62
SNX3-201ENST00000230085 ZNF793Q6ZN11 406 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 KANSL1Q7Z3B3 1105 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 NRROSQ86YC3 692 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 NKAIN4Q8IVV8 208 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 NRMQ8IXM6 262 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 PIAS4Q8N2W9 510 aaPredicted RBP18.95■□□□□ 0.62
SNX3-201ENST00000230085 FAM71CQ8NEG0 241 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 ABHD4Q8TB40 342 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 GPBAR1Q8TDU6 330 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 SLC41A3Q96GZ6 507 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 NDC1Q9BTX1 674 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 AICDAQ9GZX7 198 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 NANSQ9NR45 359 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 ZNF223Q9UK11 482 aaPredicted RBP18.95■□□□□ 0.62
SNX3-201ENST00000230085 ZNF222Q9UK12 451 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 KCNK6Q9Y257 313 aa18.95■□□□□ 0.62
SNX3-201ENST00000230085 GPR55Q9Y2T6 319 aaPredicted RBP18.95■□□□□ 0.62
SNX3-201ENST00000230085 SLC9B1P1A6NJY1 282 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 C4orf47A7E2U8 309 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 LRRN3E7EW58 273 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms