RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 FUT1P19526 365 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 PRKAR1BP31321 381 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 EVX1P49640 407 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 TAS2R20P59543 309 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 RTP2Q5QGT7 225 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 SBSNQ6UWP8 590 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 SLC16A12Q6ZSM3 486 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 GLCCI1Q86VQ1 547 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 BPHLQ86WA6 291 aaPredicted RBP12.9□□□□□ -0.34
HCFC2-201ENST00000229330 NRSN1Q8IZ57 195 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 JSRP1Q96MG2 331 aaPredicted RBP12.9□□□□□ -0.34
HCFC2-201ENST00000229330 MED20Q9H944 212 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 GPATCH2Q9NW75 528 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 PRELID3BQ9Y3B1 194 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 RNF215Q9Y6U7 377 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 ACOD1A6NK06 481 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 DIRAS3O95661 229 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 UBE2KP61086 200 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 SIM1P81133 766 aaPredicted RBP12.9□□□□□ -0.34
HCFC2-201ENST00000229330 NNATQ16517 81 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 LAS2Q8IYD9 372 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 DNAJA3Q96EY1 480 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 OR2A14Q96R47 310 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 ADAM18Q9Y3Q7 739 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 PUS1Q9Y606 427 aaKnown RBP eCLIP12.9□□□□□ -0.34
HCFC2-201ENST00000229330 ADAM10O14672 748 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 NDUFA6P56556 154 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 SIRPAP78324 504 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 SLC22A25Q6T423 547 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 L3MBTL4Q8NA19 623 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 OR10R2Q8NGX6 335 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 HOXB13Q92826 284 aaPredicted RBP12.9□□□□□ -0.34
HCFC2-201ENST00000229330 SLAMF9Q96A28 289 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 PITHD1Q9GZP4 211 aaPredicted RBP12.9□□□□□ -0.34
HCFC2-201ENST00000229330 TMEM38AQ9H6F2 299 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 CLDND1Q9NY35 253 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 SLC25A37Q9NYZ2 338 aa12.9□□□□□ -0.34
HCFC2-201ENST00000229330 CXXC1Q9P0U4 656 aaPredicted RBP12.9□□□□□ -0.34
HCFC2-201ENST00000229330 MYH9P35579 1960 aaKnown RBP12.9□□□□□ -0.34
HCFC2-201ENST00000229330 A8MVJ9 347 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 H3BUI4 141 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 BPNT1O95861 308 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 ANXA7P20073 488 aaKnown RBP12.89□□□□□ -0.35
HCFC2-201ENST00000229330 NME2P22392 152 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 MAGEB1P43366 347 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 LCTLQ6UWM7 567 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 PRSS45Q7RTY3 260 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 CMIPQ8IY22 773 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 OR52H1Q8NGJ2 320 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 FAM83CQ9BQN1 747 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 KATNB1Q9BVA0 655 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 B3GALT1Q9Y5Z6 326 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 LGALS8O00214 317 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 MPIG6BO95866 241 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 ZP3P21754 424 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 EIF2B1Q14232 305 aaKnown RBP12.89□□□□□ -0.35
HCFC2-201ENST00000229330 SYT14P1Q58G82 188 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 ZNF704Q6ZNC4 412 aaPredicted RBP12.89□□□□□ -0.35
HCFC2-201ENST00000229330 CCDC71Q8IV32 467 aaPredicted RBP12.89□□□□□ -0.35
HCFC2-201ENST00000229330 MCEMP1Q8IX19 187 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 OR1M1Q8NGA1 313 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 GLYATL2Q8WU03 294 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 POLMQ9NP87 494 aaPredicted RBP12.89□□□□□ -0.35
HCFC2-201ENST00000229330 FAM212BQ9NTI7 297 aaPredicted RBP12.89□□□□□ -0.35
HCFC2-201ENST00000229330 ELOVL2Q9NXB9 296 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 NDRG3Q9UGV2 375 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 PMS2P2O95744 297 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 RGRP47804 291 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 KCNJ10P78508 379 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 PLA2G7Q13093 441 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 DHCR24Q15392 516 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 MRPL10Q7Z7H8 261 aaKnown RBP12.89□□□□□ -0.35
HCFC2-201ENST00000229330 NANPQ8TBE9 248 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 HAS2Q92819 552 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 UCN3Q969E3 161 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 HCAR1Q9BXC0 346 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 MCCC2Q9HCC0 563 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 FZD3Q9NPG1 666 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 PRTFDC1Q9NRG1 225 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 SLC35A3Q9Y2D2 325 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 SYT7O43581 403 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 XCR1P46094 333 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 RPS15AP62244 130 aaKnown RBP12.89□□□□□ -0.35
HCFC2-201ENST00000229330 MRPL41Q8IXM3 137 aaKnown RBP12.89□□□□□ -0.35
HCFC2-201ENST00000229330 FRZBQ92765 325 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 OR8D2Q9GZM6 311 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 H0YIV9 168 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 SOCS6O14544 535 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 SPI1P17947 270 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 PRRT3Q5FWE3 981 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 C6orf132Q5T0Z8 1188 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 CCDC71LQ8N9Z2 235 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 PGAM5Q96HS1 289 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 PITX2Q99697 317 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 ST6GALNAC5Q9BVH7 336 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 CSNK1G1Q9HCP0 422 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 OR1A2Q9Y585 309 aa12.89□□□□□ -0.35
HCFC2-201ENST00000229330 SERPINF1P36955 418 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 NFATC4Q14934 902 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 RPE65Q16518 533 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms