RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 NICN1Q9BSH3 213 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 CCDC32Q9BV29 185 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 GORASP2Q9H8Y8 452 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 A0A1B0GX78 115 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 ZNF736B4DX44 427 aaPredicted RBP17.66■□□□□ 0.42
SMPD3-201ENST00000219334 ENPP1P22413 925 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 LTB4RQ15722 352 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 ACSM3Q53FZ2 586 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 OR7E24Q6IFN5 339 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 SORT1Q99523 831 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 SLC25A18Q9H1K4 315 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 POLE4Q9NR33 117 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 INPP5EQ9NRR6 644 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 GPR171O14626 319 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 ZNF749O43361 778 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 ALOX12BO75342 701 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 CLEC14AQ86T13 490 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 NAV1Q8NEY1 1877 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 FAM210AQ96ND0 272 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 PBDC1Q9BVG4 233 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 ZNF696Q9H7X3 374 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 ELOVL3Q9HB03 270 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 A0A1W2PQL4 384 aaPredicted RBP17.65■□□□□ 0.42
SMPD3-201ENST00000219334 EIF1BO60739 113 aaKnown RBP17.65■□□□□ 0.42
SMPD3-201ENST00000219334 CX3CR1P49238 355 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 CDK5R2Q13319 367 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 CBLL1Q75N03 491 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.65■□□□□ 0.42
SMPD3-201ENST00000219334 MAFIPQ8WZ33 124 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 MAELQ96JY0 434 aaKnown RBP17.65■□□□□ 0.42
SMPD3-201ENST00000219334 MRPS14O60783 128 aaKnown RBP17.65■□□□□ 0.42
SMPD3-201ENST00000219334 FAM83FQ8NEG4 500 aaPredicted RBP17.65■□□□□ 0.42
SMPD3-201ENST00000219334 ZNF681Q96N22 645 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 UBQLN2Q9UHD9 624 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 NME7Q9Y5B8 376 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 ARAFP10398 606 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 BMXP51813 675 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 NCS1P62166 190 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 C6orf15Q6UXA7 325 aaPredicted RBP17.65■□□□□ 0.42
SMPD3-201ENST00000219334 SLCO4C1Q6ZQN7 724 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 RNF113BQ8IZP6 322 aaKnown RBP17.65■□□□□ 0.42
SMPD3-201ENST00000219334 SLC30A3Q99726 388 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 LSM5Q9Y4Y9 91 aaKnown RBP17.65■□□□□ 0.42
SMPD3-201ENST00000219334 CTNSO60931 367 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 PKLRP30613 574 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 UBALD2Q8IYN6 164 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 ASCC1Q8N9N2 400 aaKnown RBP17.65■□□□□ 0.42
SMPD3-201ENST00000219334 RNF128Q8TEB7 428 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 PBX4Q9BYU1 374 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 HIPK2Q9H2X6 1198 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 CSF1P09603 554 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 SLC35E2P0CK97 266 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 CAV3P56539 151 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 SLC7A13Q8TCU3 470 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 BORCS7Q96B45 105 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 C4orf36Q96KX1 117 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 EGLN3Q9H6Z9 239 aa17.65■□□□□ 0.42
SMPD3-201ENST00000219334 UTS2O95399 124 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 SERPINA2P20848 420 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 MS4A2Q01362 244 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 EXOSC6Q5RKV6 272 aaKnown RBP17.64■□□□□ 0.41
SMPD3-201ENST00000219334 MEX3BQ6ZN04 569 aaKnown RBP17.64■□□□□ 0.41
SMPD3-201ENST00000219334 C3orf30Q96M34 536 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 RLIMQ9NVW2 624 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 CITO14578 2027 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 ZNF77Q15935 545 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 BCL7AQ4VC05 210 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 ZNF684Q5T5D7 378 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 MED25Q71SY5 747 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 SYT11Q9BT88 431 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 MS4A8Q9BY19 250 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 R3HDMLQ9H3Y0 253 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 C6orf106Q9H6K1 298 aaPredicted RBP17.64■□□□□ 0.41
SMPD3-201ENST00000219334 AGPAT4Q9NRZ5 378 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 P2RY14Q15391 338 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 SLX4IPQ5VYV7 408 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 KCTD20Q7Z5Y7 419 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 RTN4RL1Q86UN2 441 aaPredicted RBP17.64■□□□□ 0.41
SMPD3-201ENST00000219334 GDPD1Q8N9F7 314 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 TMEM163Q8TC26 289 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 ZNF649Q9BS31 505 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 C1orf198Q9H425 327 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 MYOTQ9UBF9 498 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 MYH13Q9UKX3 1938 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 DRD5P21918 477 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 OR7G1Q8NGA0 311 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 MSI2Q96DH6 328 aaKnown RBP17.64■□□□□ 0.41
SMPD3-201ENST00000219334 NLKQ9UBE8 527 aa17.64■□□□□ 0.41
SMPD3-201ENST00000219334 INTS6Q9UL03 887 aaKnown RBP17.64■□□□□ 0.41
SMPD3-201ENST00000219334 AP1G1O43747 822 aa17.63■□□□□ 0.41
SMPD3-201ENST00000219334 TP53P04637 393 aaPredicted RBP17.63■□□□□ 0.41
SMPD3-201ENST00000219334 SRFP11831 508 aa17.63■□□□□ 0.41
SMPD3-201ENST00000219334 GPR176Q14439 515 aa17.63■□□□□ 0.41
SMPD3-201ENST00000219334 WDSUB1Q8N9V3 476 aa17.63■□□□□ 0.41
SMPD3-201ENST00000219334 LKAAEAR1Q8TD35 194 aa17.63■□□□□ 0.41
SMPD3-201ENST00000219334 PDXPQ96GD0 296 aa17.63■□□□□ 0.41
SMPD3-201ENST00000219334 SULT4A1Q9BR01 284 aa17.63■□□□□ 0.41
SMPD3-201ENST00000219334 FUOMA2VDF0 154 aa17.63■□□□□ 0.41
SMPD3-201ENST00000219334 ADPRHP54922 357 aa17.63■□□□□ 0.41
SMPD3-201ENST00000219334 GPR19Q15760 415 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms