RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 DUSP22Q9NRW4 184 aa15.93■□□□□ 0.14
USB1-201ENST00000219281 SATB2Q9UPW6 733 aa15.93■□□□□ 0.14
USB1-201ENST00000219281 MRPS2Q9Y399 296 aaKnown RBP15.93■□□□□ 0.14
USB1-201ENST00000219281 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.92■□□□□ 0.14
USB1-201ENST00000219281 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.92■□□□□ 0.14
USB1-201ENST00000219281 EPXP11678 715 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 PEPDP12955 493 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 TMEM196Q5HYL7 178 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 EXOSC6Q5RKV6 272 aaKnown RBP15.92■□□□□ 0.14
USB1-201ENST00000219281 TEX261Q6UWH6 196 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 PRSS41Q7RTY9 318 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 LUZP2Q86TE4 346 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 IZUMO1Q8IYV9 350 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 CNOT9Q92600 299 aaKnown RBP15.92■□□□□ 0.14
USB1-201ENST00000219281 DACT3Q96B18 629 aaPredicted RBP15.92■□□□□ 0.14
USB1-201ENST00000219281 ORAI3Q9BRQ5 295 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 CCDC86Q9H6F5 360 aaKnown RBP15.92■□□□□ 0.14
USB1-201ENST00000219281 IL21RQ9HBE5 538 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 DIABLOQ9NR28 239 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 HAO2Q9NYQ3 351 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 FLRT3Q9NZU0 649 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 ELF5Q9UKW6 265 aaPredicted RBP15.92■□□□□ 0.14
USB1-201ENST00000219281 AK6Q9Y3D8 172 aaKnown RBP15.92■□□□□ 0.14
USB1-201ENST00000219281 U3KQ87 197 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 TBC1D3DA0A087WVF3 549 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 TBC1D3IA0A087WXS9 549 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 TRAV1-2A0A0B4J238 106 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 TBC1D3LB9A6J9 549 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 LRRN3E7EW58 273 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 MEN1O00255 615 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 FLRT2O43155 660 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 SERPINA3P01011 423 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 CT62P0C5K7 136 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 TBC1D3HP0C7X1 549 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 GDI2P50395 445 aaKnown RBP15.92■□□□□ 0.14
USB1-201ENST00000219281 ST3GAL2Q16842 350 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 TBC1D3CQ6IPX1 549 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 ZNF613Q6PF04 617 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 ZC3H14Q6PJT7 736 aaKnown RBP15.92■□□□□ 0.14
USB1-201ENST00000219281 TBC1D3Q8IZP1 549 aaPredicted RBP15.92■□□□□ 0.14
USB1-201ENST00000219281 ZNF687Q8N1G0 1237 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 OR52E2Q8NGJ4 325 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 OR51L1Q8NGJ5 315 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 OR51Q1Q8NH59 317 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 CCL4L1Q8NHW4 92 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 FLVCR1-AS1Q8TAF5 88 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 SUN5Q8TC36 379 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 SLC2A12Q8TD20 617 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 ADAMTS14Q8WXS8 1223 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 ZNF559Q9BR84 538 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 LRRN3Q9H3W5 708 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 BEX1Q9HBH7 125 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 MCCC2Q9HCC0 563 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 ABRACLQ9P1F3 81 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 MSRAQ9UJ68 235 aa15.92■□□□□ 0.14
USB1-201ENST00000219281 SLC22A5O76082 557 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 TFP02787 698 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 NGFRP08138 427 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 H2AFB2P0C5Z0 115 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 TNFRSF4P43489 277 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 POU6F2P78424 691 aaPredicted RBP15.91■□□□□ 0.14
USB1-201ENST00000219281 POU4F2Q12837 409 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 GSG1Q2KHT4 349 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 PRRT3Q5FWE3 981 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 ZNF776Q68DI1 518 aaPredicted RBP15.91■□□□□ 0.14
USB1-201ENST00000219281 FCRL6Q6DN72 434 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 SIGIRRQ6IA17 410 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 RTL4Q6ZR62 310 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 CCDC28AQ8IWP9 274 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 OR8H3Q8N146 312 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 SDR9C7Q8NEX9 313 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 HAVCR2Q8TDQ0 301 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 GIMAP1Q8WWP7 306 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 PELI1Q96FA3 418 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 ERMAPQ96PL5 475 aaPredicted RBP15.91■□□□□ 0.14
USB1-201ENST00000219281 STACQ99469 402 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 BAIAP2Q9UQB8 552 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 SCN2AQ99250 2005 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 A0A0B4J2E0 115 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 A0A1B0GWA3 101 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 A0A1B0GX12 115 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 POM121BA6NF01 834 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 URADA6NGE7 173 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 BRINP1O60477 761 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 IFNGP01579 166 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 WNT1P04628 370 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 ATP1B1P05026 303 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 SLC6A6P31641 620 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 NAA10P41227 235 aaPredicted RBP15.91■□□□□ 0.14
USB1-201ENST00000219281 ENPP7Q6UWV6 458 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 FAM98AQ8NCA5 519 aaKnown RBP15.91■□□□□ 0.14
USB1-201ENST00000219281 ZNF680Q8NEM1 530 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 OR6C4Q8NGE1 309 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 OR5T3Q8NGG3 340 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 OR4K13Q8NH42 304 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 OR10G6Q8NH81 332 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 OR1E3Q8WZA6 343 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 FAM131CQ96AQ9 280 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 SLC22A18Q96BI1 424 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 SCARF2Q96GP6 870 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms