RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Pif1Q80SX8 650 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Hapln3Q80WM5 359 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Chst2Q80WV3 530 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ddhd2Q80Y98 699 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Flrt3Q8BGT1 649 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Lkaaear1Q8BIG2 198 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Hs3st5Q8BSL4 346 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Acot4Q8BWN8 421 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Emc1Q8C7X2 997 aaKnown RBP13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 EndovQ8C9A2 338 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 GatcQ8CBY0 155 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Nsun3Q8CCT7 348 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ppp1r8Q8R3G1 351 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr330Q8VGD9 315 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Dtnbp1Q91WZ8 352 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 AassQ99K67 926 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Plxdc2Q9DC11 530 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tmem176aQ9DCS1 244 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Il23aQ9EQ14 196 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tor3aQ9ER38 385 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Slc6a14Q9JMA9 638 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr71Q9QZ18 312 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Prr12E9PYL2 2035 aaKnown RBP13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Cabin1G3X8Q1 2187 aaKnown RBP13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr1006A2ALD2 312 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 ItpkbB2RXC2 942 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Kif1cO35071 1100 aaKnown RBP13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Klk1b1P00755 261 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Hrh3P58406 445 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Dnaja1P63037 397 aaKnown RBP13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 VegfdP97946 358 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tle3Q08122 772 aaKnown RBP13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Mier2Q3U3N0 541 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Elavl2Q60899 360 aaKnown RBP13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Laptm5Q61168 261 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Rpa2Q62193 270 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 IppkQ6P1C1 489 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Zfp954Q7TNU5 416 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr169Q7TS53 313 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Rsbn1Q80T69 795 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Rap2aQ80ZJ1 183 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Reep1Q8BGH4 201 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Q8BHG2 160 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Prox2Q8BII1 593 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 GmppbQ8BTZ7 360 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Wdr37Q8CBE3 496 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 1700020N01RikQ8CF20 87 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 TbceQ8CIV8 524 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Coq9Q8K1Z0 313 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 MepeQ8K4L6 441 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Cant1Q8VCF1 403 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr488Q8VG02 314 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Znf24Q91VN1 368 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Pcdhgc3Q91XX1 934 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Sfxn2Q925N2 322 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 St7Q99M96 577 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ska1Q9CPV1 254 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Wif1Q9WUA1 379 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 PrknQ9WVS6 464 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Cib1Q9Z0F4 191 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Cacna1aP97445 2368 aa13.41□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gm7682A0A0J9YUM1 481 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 1810010D01RikA0A1L1SR87 51 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Lrrc72A0A1Y7VMI0 288 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Awat1A2ADU9 328 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ccdc7bE9Q9Y3 381 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Vmn2r95L7N274 845 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Fgf3P05524 245 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tfap2aP34056 437 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 FstP47931 344 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Pcbp4P57724 403 aaKnown RBP13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 ElaneQ3UP87 265 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Q5EBG8 199 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Krr1Q8BGA5 380 aaKnown RBP13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Sult2a8Q8BGL3 282 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Sulf2Q8CFG0 875 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Neurl3Q8CJC5 254 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Q8K039 155 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Zbtb20Q8K0L9 741 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Coq6Q8R1S0 476 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Guca1bQ8VBV8 201 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ocel1Q8VCR9 219 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr1387Q8VFA9 311 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr51Q8VGG9 307 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Asb16Q8VHS5 453 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Sp7Q8VI67 428 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Uckl1Q91YL3 548 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Slc41a3Q921R8 488 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Cdca4Q9CWM2 237 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Trim2Q9ESN6 744 aaKnown RBP13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr545Q9WU94 316 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 CrebbpP45481 2441 aa13.4□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Heatr5bQ8C547 2070 aa13.4□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Med13Q5SWW4 2171 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Igkv12-44A0A140T8M2 115 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gm12666A2AMD0 254 aaKnown RBP13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 DytnA2CI98 653 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gm3752A6NAT4 150 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Esp22A8R0V4 111 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Mthfd2lD3YZG8 338 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms